Gene: si:dkey-246g23.4 - ENSDARG00000013775 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000013775
Name	si:dkey-246g23.4
Description	si:dkey-246g23.4 [Source:ZFIN;Acc:ZDB-GENE-050419-234]
Organism	Danio rerio (zebrafish)
Paralog(s)	19 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	2.35e3 2.35e3	92.12 92.12	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	3.33e3 3.33e3	88.86 88.86	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	5.70e3 5.70e3	80.93 80.93	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	7.40e3 7.40e3	75.24 75.24	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	1.04e4 1.04e4	65.14 65.14	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	1.36e4 1.36e4	54.31 54.31	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	1.42e4 1.42e4	52.38 52.38	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	1.52e4 1.52e4	48.98 48.98	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.58e4 1.58e4	47.22 47.22	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	1.77e4 1.77e4 2.25e4	40.63 40.63 24.77	AEIR AEIR AEIR
UBERON:0000922	embryo	[+] 4 stages ZFS:0000037Larval:Day 5 UBERON:0000068embryo stage UBERON:0004707pharyngula stage ZFS:0000029Pharyngula:Prim-5	1.79e4 1.79e4 2.11e4 2.14e4 2.14e4	40.12 40.12 29.45 28.29 28.27	AEIR AEIR AEIR AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	1.96e4 1.96e4	34.36 34.36	AEIR AEIR
UBERON:0000033	head	[+] 1 stage UBERON:0000066fully formed stage	2.10e4 2.10e4	29.52 29.52	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	2.42e4 2.42e4	18.93 18.93	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

EST data: Bgee
RNA-Seq data: Bgee

Sources of raw data:

EST data: UniGene
RNA-Seq data: GEO

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Chordata	10 genes ENSDARG00000016963 slc16a1a ENSDARG00000017773 slc16a12a ENSDARG00000021573 slc16a7 ENSDARG00000028583 SLC16A3 (1 to many) ENSDARG00000045051 slc16a3 ENSDARG00000045153 slc16a8 ENSDARG00000055342 SLC16A13 ENSDARG00000068572 slc16a1b ENSDARG00000089885 slc16a12b ENSDARG00000098258 SLC16A7	Compare expression	[+]
Opisthokonta	19 genes ENSDARG00000013926 slc16a9a ENSDARG00000016963 slc16a1a ENSDARG00000017773 slc16a12a ENSDARG00000020984 slc16a10 ENSDARG00000021573 slc16a7 ENSDARG00000028583 SLC16A3 (1 to many) ENSDARG00000030472 slc16a5a ENSDARG00000045051 slc16a3 ENSDARG00000045153 slc16a8 ENSDARG00000052109 zgc:114041 ENSDARG00000055342 SLC16A13 ENSDARG00000060246 slc16a6b ENSDARG00000068572 slc16a1b ENSDARG00000089885 slc16a12b ENSDARG00000098258 SLC16A7 ENSDARG00000102668 slc16a5b ENSDARG00000102793 slc16a6a ENSDARG00000104629 SLC16A6 (1 to many) ENSDARG00000104687 slc16a9b	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000013775.

Cross-references

Ensembl	ENSDARG00000013775 (si:dkey-246g23.4)
ZFIN	ZDB-GENE-050419-234 (si:dkey-246g23.4)
EMBL	BX908742, CT025859
Uniprot/SPTREMBL	A5WVP4, A5WVP4_DANRE, A5WVP5, A5WVP5_DANRE, F1QHU5, F1QHU5_DANRE