D. rerio Gene: arhgef3 - ENSDARG00000013834 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000013834
Namearhgef3
DescriptionRho guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-050208-773]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-258l4.8

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.65283
  • 65.65283
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.22985
  • 63.22985
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.19e4
  • 1.19e4
  • 1.32e4
  • 1.32e4
  • 1.72e4
  • 1.89e4
59.69784
  • 59.69784
  • 55.34450
  • 55.31989
  • 42.01504
  • 36.20678
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.49692
  • 56.49692
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.55405
  • 55.55405
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.41456
  • 53.41456
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.18111
  • 52.18111
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.21780
  • 50.21780
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.39922
  • 49.39922
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.38938
  • 48.38938
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
44.62339
  • 44.62339
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.23717
  • 42.23717
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.73e4
  • 1.73e4
41.37191
  • 41.37191
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.76e4
  • 1.76e4
  • 1.99e4
40.53369
  • 40.53369
  • 32.66987
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.94e4
  • 1.94e4
34.28564
  • 34.28564
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.08e4
  • 2.08e4
29.74161
  • 29.74161
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAL953867
EnsemblENSDARG00000013834 (arhgef3)
Uniprot/SPTREMBLE7F7P2, E7F7P2_DANRE, Q1MT42, Q1MT42_DANRE
ZFINZDB-GENE-050208-773 (arhgef3)

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