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D. rerio Gene: sept5a - ENSDARG00000013843 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000013843
Namesept5a
Descriptionseptin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7868]
OrganismDanio rerio (zebrafish)
Synonym(s)fj37h04, sept5, wu:fj37h04, zgc:73218
Orthologs(s)22 orthologs
Paralog(s)13 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
887
  • 887
  • 1.04e4
  • 1.45e4
97.03
  • 97.03
  • 65.29
  • 51.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.73e3
  • 1.73e3
  • 2.01e3
94.22
  • 94.22
  • 93.27
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
3.11e3
  • 3.11e3
  • 5.09e3
  • 5.29e3
  • 6.66e3
  • 6.96e3
  • 7.40e3
  • 1.17e4
  • 1.45e4
  • 1.45e4
  • 1.75e4
89.58
  • 89.58
  • 82.96
  • 82.28
  • 77.69
  • 76.70
  • 75.22
  • 60.91
  • 51.55
  • 51.30
  • 41.29
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.62e3
  • 3.62e3
87.89
  • 87.89
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.82e3
  • 3.82e3
87.21
  • 87.21
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.71e3
  • 4.71e3
84.24
  • 84.24
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.31e3
  • 5.31e3
82.24
  • 82.24
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.60e3
  • 6.60e3
77.90
  • 77.90
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • UBERON:0000106zygote stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
6.90e3
  • 6.90e3
  • 1.14e4
  • 1.21e4
  • 1.25e4
  • 1.27e4
  • 1.31e4
  • 1.36e4
  • 1.41e4
  • 1.41e4
  • 1.46e4
  • 1.65e4
  • 1.67e4
  • 1.68e4
76.90
  • 76.90
  • 61.94
  • 59.59
  • 57.99
  • 57.52
  • 56.16
  • 54.36
  • 52.87
  • 52.63
  • 50.95
  • 44.72
  • 44.00
  • 43.84
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
7.17e3
  • 7.17e3
  • 9.46e3
  • 1.02e4
76.00
  • 76.00
  • 68.31
  • 65.73
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
8.24e3
  • 8.24e3
  • 1.19e4
  • 1.22e4
  • 1.65e4
72.41
  • 72.41
  • 60.10
  • 59.19
  • 44.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.97e3
  • 9.97e3
66.63
  • 66.63
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
9.99e3
  • 9.99e3
  • 1.09e4
  • 1.51e4
  • 1.74e4
66.55
  • 66.55
  • 63.36
  • 49.36
  • 41.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.02e4
  • 1.02e4
65.99
  • 65.99
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
1.12e4
  • 1.12e4
  • 1.58e4
  • 1.75e4
62.36
  • 62.36
  • 47.18
  • 41.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.97
  • 57.97
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.30e4
  • 1.30e4
56.41
  • 56.41
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.70
  • 55.70
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.32e4
  • 1.32e4
55.64
  • 55.64
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
  • 1.34e4
55.33
  • 55.33
  • 55.08
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.13
  • 54.13
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
  • 1.74e4
53.92
  • 53.92
  • 41.69
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.74
  • 53.74
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.22
  • 50.22
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.91
  • 45.91
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
45.13
  • 45.13
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.48
  • 43.48
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
40.91
  • 40.91
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.09e4
  • 2.09e4
30.02
  • 30.02
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi15 species15 genesCompare expression
Bilateria21 species22 genesCompare expression

Orthology information comes from OMA : ENSDARG00000013843.

Paralogs (same species)

Paralogy information comes from OMA : ENSDARG00000013843.

Cross-references

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