D. rerio Gene: spata20 - ENSDARG00000013880 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000013880
Namespata20
Descriptionspermatogenesis associated 20 [Source:ZFIN;Acc:ZDB-GENE-030131-7269]
OrganismDanio rerio (zebrafish)
Synonym(s)fj02d07, wu:fj02d07
Orthologs(s)25 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.59e3
  • 1.59e3
94.69
  • 94.69
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.32e3
  • 2.32e3
92.22
  • 92.22
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
2.39e3
  • 2.39e3
  • 1.15e4
  • 1.30e4
  • 1.31e4
92.01
  • 92.01
  • 61.38
  • 56.46
  • 56.30
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
3.48e3
  • 3.48e3
  • 5.94e3
88.34
  • 88.34
  • 80.12
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.83e3
  • 3.83e3
87.17
  • 87.17
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
4.79e3
  • 4.79e3
83.96
  • 83.96
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.42e3
  • 5.42e3
81.87
  • 81.87
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
6.09e3
  • 6.09e3
  • 7.75e3
  • 9.79e3
  • 1.08e4
  • 1.12e4
  • 1.25e4
79.60
  • 79.60
  • 74.04
  • 67.22
  • 63.68
  • 62.55
  • 58.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
7.11e3
  • 7.11e3
  • 1.63e4
76.18
  • 76.18
  • 45.37
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
7.90e3
  • 7.90e3
73.54
  • 73.54
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
8.01e3
  • 8.01e3
  • 8.28e3
  • 9.64e3
  • 9.71e3
  • 1.10e4
73.19
  • 73.19
  • 72.27
  • 67.72
  • 67.49
  • 63.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.61e3
  • 8.61e3
71.16
  • 71.16
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.80e3
  • 8.80e3
70.52
  • 70.52
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.83e3
  • 8.83e3
70.44
  • 70.44
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.87e3
  • 8.87e3
70.30
  • 70.30
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000037Larval:Day 5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000036Larval:Day 4
  • UBERON:0000106zygote stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
9.10e3
  • 9.10e3
  • 9.75e3
  • 1.00e4
  • 1.11e4
  • 1.14e4
  • 1.14e4
  • 1.20e4
  • 1.22e4
  • 1.23e4
  • 1.27e4
  • 1.29e4
  • 1.30e4
  • 1.31e4
  • 1.37e4
69.52
  • 69.52
  • 67.36
  • 66.50
  • 62.88
  • 61.88
  • 61.81
  • 59.93
  • 59.00
  • 58.84
  • 57.52
  • 56.75
  • 56.37
  • 56.04
  • 54.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.48e3
  • 9.48e3
68.27
  • 68.27
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.72e3
  • 9.72e3
67.47
  • 67.47
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
9.95e3
  • 9.95e3
66.68
  • 66.68
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.50
  • 63.50
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.12e4
  • 1.12e4
62.42
  • 62.42
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.14
  • 62.14
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.14e4
  • 1.14e4
  • 1.21e4
  • 1.31e4
61.87
  • 61.87
  • 59.61
  • 56.24
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.79
  • 60.79
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
1.27e4
  • 1.27e4
  • 1.39e4
  • 1.49e4
  • 1.60e4
  • 1.69e4
  • 1.75e4
  • 1.75e4
57.64
  • 57.64
  • 53.46
  • 50.14
  • 46.46
  • 43.51
  • 41.45
  • 41.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.54
  • 56.54
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.88
  • 55.88
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.37
  • 55.37
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.42e4
  • 1.42e4
52.58
  • 52.58
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species18 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSDARG00000013880.

Cross-references

EnsemblENSDARG00000013880 (spata20)
ZFINZDB-GENE-030131-7269 (spata20)
EMBLAL833789, CU210844
Uniprot/SPTREMBLE7F7E2, E7F7E2_DANRE

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