D. rerio Gene: cul2 - ENSDARG00000013965 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000013965
Namecul2
Descriptioncullin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8032]
OrganismDanio rerio (zebrafish)
Synonym(s)fj48a06, wu:fj48a06
Orthologs(s)26 orthologs
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
3.93e3
  • 3.93e3
  • 4.35e3
  • 4.90e3
  • 5.79e3
  • 5.85e3
86.83
  • 86.83
  • 85.44
  • 83.60
  • 80.61
  • 80.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
4.24e3
  • 4.24e3
  • 5.33e3
  • 5.85e3
  • 5.87e3
  • 6.08e3
  • 6.25e3
  • 6.76e3
  • 6.78e3
  • 7.02e3
  • 8.23e3
85.79
  • 85.79
  • 82.16
  • 80.42
  • 80.35
  • 79.64
  • 79.08
  • 77.37
  • 77.29
  • 76.49
  • 72.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
4.25e3
  • 4.25e3
  • 4.96e3
  • 6.33e3
  • 7.86e3
85.77
  • 85.77
  • 83.38
  • 78.80
  • 73.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
4.30e3
  • 4.30e3
  • 5.83e3
85.60
  • 85.60
  • 80.47
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.44e3
  • 4.44e3
85.13
  • 85.13
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.48e3
  • 4.48e3
85.00
  • 85.00
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
4.52e3
  • 4.52e3
84.88
  • 84.88
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
4.64e3
  • 4.64e3
84.46
  • 84.46
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.69e3
  • 4.69e3
84.29
  • 84.29
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
4.94e3
  • 4.94e3
83.48
  • 83.48
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.00e3
  • 5.00e3
83.25
  • 83.25
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.17e3
  • 5.17e3
82.70
  • 82.70
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.18e3
  • 5.18e3
82.66
  • 82.66
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.24e3
  • 5.24e3
  • 5.68e3
82.47
  • 82.47
  • 80.99
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
5.25e3
  • 5.25e3
  • 5.82e3
82.43
  • 82.43
  • 80.52
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
5.29e3
  • 5.29e3
  • 6.16e3
  • 6.80e3
  • 7.79e3
  • 7.88e3
  • 8.34e3
82.30
  • 82.30
  • 79.38
  • 77.22
  • 73.91
  • 73.61
  • 72.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
5.39e3
  • 5.39e3
81.94
  • 81.94
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.54e3
  • 5.54e3
81.47
  • 81.47
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
5.65e3
  • 5.65e3
  • 9.15e3
81.08
  • 81.08
  • 69.37
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.81e3
  • 5.81e3
80.55
  • 80.55
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000106zygote stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0004707pharyngula stage
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
6.05e3
  • 6.05e3
  • 6.33e3
  • 6.44e3
  • 6.71e3
  • 6.71e3
  • 6.75e3
  • 7.12e3
  • 7.13e3
  • 7.17e3
  • 7.39e3
  • 7.42e3
  • 7.46e3
  • 7.46e3
  • 7.86e3
  • 1.03e4
  • 1.10e4
  • 1.14e4
  • 1.22e4
  • 1.22e4
  • 1.22e4
  • 1.24e4
  • 1.24e4
  • 1.29e4
  • 1.29e4
79.75
  • 79.75
  • 78.80
  • 78.43
  • 77.53
  • 77.53
  • 77.41
  • 76.16
  • 76.12
  • 76.01
  • 75.24
  • 75.15
  • 75.03
  • 75.03
  • 73.69
  • 65.61
  • 63.32
  • 61.75
  • 59.08
  • 59.08
  • 59.08
  • 58.32
  • 58.32
  • 56.65
  • 56.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.08e3
  • 6.08e3
79.65
  • 79.65
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.16e3
  • 6.16e3
79.39
  • 79.39
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.23e3
  • 6.23e3
79.15
  • 79.15
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
6.33e3
  • 6.33e3
  • 6.90e3
  • 7.10e3
78.80
  • 78.80
  • 76.89
  • 76.24
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.67e3
  • 6.67e3
77.66
  • 77.66
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.79e3
  • 6.79e3
77.27
  • 77.27
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
7.27e3
  • 7.27e3
75.67
  • 75.67
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.27e3
  • 7.27e3
75.65
  • 75.65
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.39e3
  • 7.39e3
75.26
  • 75.26
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.02e3
  • 8.02e3
73.15
  • 73.15
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.56e3
  • 8.56e3
71.36
  • 71.36
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.47
  • 55.47
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species19 genesCompare expression
Bilateria26 species26 genesCompare expression

Orthology information comes from OMA : ENSDARG00000013965.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Eukaryota6 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000013965.

Cross-references

EnsemblENSDARG00000013965 (cul2)
ZFINZDB-GENE-030131-8032 (cul2)
EMBLBX294164
Uniprot/SPTREMBLE9QBK5, E9QBK5_DANRE, E9QCA9, E9QCA9_DANRE

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