D. rerio Gene: cwc22 - ENSDARG00000014008 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000014008
Namecwc22
DescriptionCWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-452]
OrganismDanio rerio (zebrafish)
Synonym(s)fb13g08, fi16b02, wu:fb13g08, wu:fi16b02, zgc:153452
Orthologs(s)27 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
1.12e3
  • 1.12e3
  • 1.52e3
  • 1.57e3
  • 2.28e3
  • 2.84e3
96.24
  • 96.24
  • 94.92
  • 94.73
  • 92.35
  • 90.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
1.50e3
  • 1.50e3
  • 2.06e3
  • 2.21e3
  • 2.41e3
  • 3.12e3
  • 3.42e3
94.99
  • 94.99
  • 93.12
  • 92.60
  • 91.95
  • 89.55
  • 88.56
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
2.07e3
  • 2.07e3
93.06
  • 93.06
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.26e3
  • 2.26e3
92.45
  • 92.45
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000106zygote stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • ZFS:0000049segmentation
2.32e3
  • 2.32e3
  • 2.53e3
  • 2.71e3
  • 2.74e3
  • 2.84e3
  • 3.16e3
  • 4.49e3
  • 4.68e3
  • 5.17e3
  • 5.56e3
  • 5.59e3
  • 5.98e3
  • 6.11e3
  • 6.78e3
  • 1.34e4
  • 1.41e4
  • 1.49e4
  • 1.49e4
92.22
  • 92.22
  • 91.53
  • 90.93
  • 90.82
  • 90.49
  • 89.43
  • 84.96
  • 84.33
  • 82.67
  • 81.40
  • 81.27
  • 79.98
  • 79.55
  • 77.31
  • 55.05
  • 52.86
  • 50.20
  • 49.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
2.35e3
  • 2.35e3
92.12
  • 92.12
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.41e3
  • 2.41e3
91.95
  • 91.95
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.85e3
  • 2.85e3
  • 3.24e3
  • 5.67e3
  • 7.38e3
90.45
  • 90.45
  • 89.16
  • 81.03
  • 75.30
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
3.22e3
  • 3.22e3
  • 3.74e3
  • 3.80e3
  • 4.25e3
  • 4.50e3
  • 4.59e3
  • 4.71e3
  • 5.13e3
  • 7.27e3
  • 7.35e3
89.22
  • 89.22
  • 87.48
  • 87.27
  • 85.76
  • 84.93
  • 84.65
  • 84.25
  • 82.82
  • 75.66
  • 75.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.50e3
  • 3.50e3
88.30
  • 88.30
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
3.84e3
  • 3.84e3
87.15
  • 87.15
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
3.89e3
  • 3.89e3
86.96
  • 86.96
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
4.62e3
  • 4.62e3
  • 8.11e3
84.53
  • 84.53
  • 72.83
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.87e3
  • 4.87e3
83.68
  • 83.68
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.93e3
  • 4.93e3
83.50
  • 83.50
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
4.99e3
  • 4.99e3
83.31
  • 83.31
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.11e3
  • 5.11e3
82.88
  • 82.88
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.13e3
  • 5.13e3
82.84
  • 82.84
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
5.39e3
  • 5.39e3
  • 6.42e3
81.94
  • 81.94
  • 78.49
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.68e3
  • 5.68e3
80.98
  • 80.98
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.81e3
  • 5.81e3
80.55
  • 80.55
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
5.82e3
  • 5.82e3
  • 7.23e3
80.52
  • 80.52
  • 75.78
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.86e3
  • 5.86e3
80.39
  • 80.39
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.38e3
  • 6.38e3
  • 8.57e3
78.65
  • 78.65
  • 71.32
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
6.39e3
  • 6.39e3
  • 6.86e3
  • 7.29e3
78.60
  • 78.60
  • 77.02
  • 75.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.83e3
  • 6.83e3
77.15
  • 77.15
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.84e3
  • 6.84e3
77.10
  • 77.10
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.10e3
  • 7.10e3
76.22
  • 76.22
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.16e3
  • 7.16e3
76.02
  • 76.02
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.28e3
  • 7.28e3
75.63
  • 75.63
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
7.35e3
  • 7.35e3
75.39
  • 75.39
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.03e3
  • 8.03e3
73.11
  • 73.11
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.72e3
  • 9.72e3
67.45
  • 67.45
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
  • 1.50e4
55.16
  • 55.16
  • 49.94
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species26 genesCompare expression
Bilateria19 species27 genesCompare expression

Orthology information comes from OMA : ENSDARG00000014008.

Cross-references

EnsemblENSDARG00000014008 (cwc22)
ZFINZDB-GENE-060929-452 (cwc22)
EMBLBX470219
Uniprot/SPTREMBLB0S6B1, B0S6B1_DANRE

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