D. rerio Gene: cldn5b - ENSDARG00000014059 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000014059
Namecldn5b
Descriptionclaudin 5b [Source:ZFIN;Acc:ZDB-GENE-041010-140]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:103419

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
305
  • 305
98.97250
  • 98.97250
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.68e3
  • 1.68e3
94.32944
  • 94.32944
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.94e3
  • 2.94e3
90.05966
  • 90.05966
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.11e3
  • 4.11e3
86.11637
  • 86.11637
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
4.28e3
  • 4.28e3
  • 6.08e3
85.55084
  • 85.55084
  • 79.46208
AEIR
  • AEIR
  • AEIR
UBERON:0001638vein
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
4.55e3
  • 4.55e3
  • 4.55e3
  • 5.92e3
84.61200
  • 84.61200
  • 84.61200
  • 79.99324
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.63e3
  • 4.63e3
84.36111
  • 84.36111
AEIR
  • AEIR
UBERON:0004535cardiovascular system
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
4.93e3
  • 4.93e3
  • 5.29e3
  • 5.29e3
  • 8.22e3
  • 8.88e3
  • 1.08e4
  • 1.08e4
83.32827
  • 83.32827
  • 82.13780
  • 82.13780
  • 72.21716
  • 69.99324
  • 63.62621
  • 63.62621
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
5.59e3
  • 5.59e3
  • 5.77e3
  • 6.69e3
  • 7.00e3
  • 9.65e3
81.12382
  • 81.12382
  • 80.51067
  • 77.39611
  • 76.34056
  • 67.39391
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.36e3
  • 6.36e3
78.51047
  • 78.51047
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
6.44e3
  • 6.44e3
78.23989
  • 78.23989
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.25e3
  • 7.25e3
75.50234
  • 75.50234
AEIR
  • AEIR
UBERON:0005492hyaloid vessel
  • ZFS:0000034Hatching:Pec-fin
7.40e3
  • 7.40e3
75.00167
  • 75.00167
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.93e3
  • 8.93e3
69.81714
  • 69.81714
AEIR
  • AEIR
UBERON:2000083ventral mesoderm
  • ZFS:0000026Segmentation:14-19 somites
1.04e4
  • 1.04e4
64.68900
  • 64.68900
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
61.89478
  • 61.89478
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.14e4
  • 1.14e4
  • 1.18e4
61.33828
  • 61.33828
  • 59.97634
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.38396
  • 60.38396
AEIR
  • AEIR
UBERON:0005805dorsal aorta
  • ZFS:0000029Pharyngula:Prim-5
1.37e4
  • 1.37e4
53.55284
  • 53.55284
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.45512
  • 53.45512
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
52.57411
  • 52.57411
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000066fully formed stage
  • ZFS:0000040Larval:Days 14-20
1.42e4
  • 1.42e4
  • 1.43e4
51.99138
  • 51.99138
  • 51.56722
AEIR
  • AEIR
  • AEIR
UBERON:0002270hyaloid artery
  • ZFS:0000033Hatching:Long-pec
1.48e4
  • 1.48e4
50.00169
  • 50.00169
AEIR
  • AEIR
UBERON:0004638blood vessel endothelium
  • ZFS:0000035Larval:Protruding-mouth
1.48e4
  • 1.48e4
50.00169
  • 50.00169
AEIR
  • AEIR
UBERON:0006011hyaloid vein
  • ZFS:0000033Hatching:Long-pec
1.48e4
  • 1.48e4
50.00169
  • 50.00169
AEIR
  • AEIR
UBERON:0011362cranial blood vasculature
  • ZFS:0000035Larval:Protruding-mouth
1.48e4
  • 1.48e4
50.00169
  • 50.00169
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
39.78705
  • 39.78705
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLCR384089
EnsemblENSDARG00000014059 (cldn5b)
Uniprot/SPTREMBLF1R5J2, F1R5J2_DANRE
ZFINZDB-GENE-041010-140 (cldn5b)

Do not show this banner again