D. rerio Gene: bloc1s1 - ENSDARG00000014171 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000014171
Namebloc1s1
Descriptionbiogenesis of lysosomal organelles complex-1, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050208-569]
OrganismDanio rerio (zebrafish)
Synonym(s)loc556597, si:dkey-102c8.4, si:dkey-102c8.4gn
Orthologs(s)22 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.97e3
  • 1.97e3
93.40
  • 93.40
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.61e3
  • 2.61e3
  • 8.16e3
91.25
  • 91.25
  • 72.68
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.03e3
  • 3.03e3
89.85
  • 89.85
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.10e3
  • 3.10e3
89.62
  • 89.62
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.10e3
  • 3.10e3
89.62
  • 89.62
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
3.23e3
  • 3.23e3
  • 6.44e3
89.19
  • 89.19
  • 78.45
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.43e3
  • 3.43e3
88.53
  • 88.53
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.63e3
  • 3.63e3
87.84
  • 87.84
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.80e3
  • 3.80e3
87.29
  • 87.29
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.01e3
  • 4.01e3
86.59
  • 86.59
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
4.11e3
  • 4.11e3
  • 4.13e3
  • 5.44e3
  • 6.73e3
  • 7.71e3
  • 8.19e3
  • 8.45e3
  • 8.60e3
  • 8.69e3
  • 8.70e3
86.24
  • 86.24
  • 86.17
  • 81.78
  • 77.46
  • 74.19
  • 72.58
  • 71.71
  • 71.20
  • 70.91
  • 70.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.11e3
  • 4.11e3
86.23
  • 86.23
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
4.40e3
  • 4.40e3
  • 5.05e3
  • 5.58e3
  • 8.75e3
  • 9.41e3
85.27
  • 85.27
  • 83.10
  • 81.33
  • 70.69
  • 68.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.78e3
  • 4.78e3
84.01
  • 84.01
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.78e3
  • 4.78e3
83.98
  • 83.98
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
4.85e3
  • 4.85e3
  • 6.70e3
  • 9.38e3
83.78
  • 83.78
  • 77.58
  • 68.61
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
4.95e3
  • 4.95e3
  • 6.25e3
83.43
  • 83.43
  • 79.06
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000027Segmentation:20-25 somites
  • UBERON:0000106zygote stage
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
4.98e3
  • 4.98e3
  • 6.54e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.97e3
  • 7.03e3
  • 7.03e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 8.24e3
  • 8.33e3
  • 8.40e3
  • 8.41e3
  • 8.54e3
  • 8.87e3
  • 8.96e3
  • 8.96e3
  • 9.36e3
  • 9.43e3
  • 9.44e3
  • 9.47e3
  • 9.63e3
  • 1.05e4
  • 1.12e4
83.33
  • 83.33
  • 78.12
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.66
  • 76.47
  • 76.46
  • 74.99
  • 74.99
  • 73.52
  • 72.42
  • 72.11
  • 71.89
  • 71.83
  • 71.40
  • 70.32
  • 69.99
  • 69.99
  • 68.67
  • 68.43
  • 68.38
  • 68.30
  • 67.76
  • 64.76
  • 62.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.22e3
  • 5.22e3
82.54
  • 82.54
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
5.72e3
  • 5.72e3
  • 6.67e3
  • 6.86e3
  • 7.03e3
80.85
  • 80.85
  • 77.67
  • 77.02
  • 76.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.96e3
  • 5.96e3
80.05
  • 80.05
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.21e3
  • 6.21e3
79.21
  • 79.21
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
6.67e3
  • 6.67e3
77.66
  • 77.66
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
7.33e3
  • 7.33e3
  • 9.07e3
  • 9.67e3
  • 1.02e4
  • 1.03e4
  • 1.05e4
75.45
  • 75.45
  • 69.62
  • 67.62
  • 65.99
  • 65.38
  • 64.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
7.86e3
  • 7.86e3
73.69
  • 73.69
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.97e3
  • 7.97e3
73.30
  • 73.30
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.08e3
  • 8.08e3
72.95
  • 72.95
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
8.08e3
  • 8.08e3
72.95
  • 72.95
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
8.45e3
  • 8.45e3
  • 8.65e3
71.72
  • 71.72
  • 71.05
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.81e3
  • 8.81e3
70.49
  • 70.49
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.10e4
  • 1.10e4
63.33
  • 63.33
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.42
  • 62.42
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.01
  • 54.01
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi15 species15 genesCompare expression
Bilateria22 species22 genesCompare expression

Orthology information comes from OMA : ENSDARG00000014171.

Cross-references

EnsemblENSDARG00000014171 (bloc1s1)
ZFINZDB-GENE-050208-569 (bloc1s1)
EMBLBC135064, BX324213
Uniprot/SPTREMBLQ1LXG2, Q1LXG2_DANRE

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