D. rerio Gene: sst2 - ENSDARG00000014190 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000014190
Namesst2
Descriptionsomatostatin 2 [Source:ZFIN;Acc:ZDB-GENE-010219-2]
OrganismDanio rerio (zebrafish)
Synonym(s)ppss2, smst, som, ss4, ssii, sst

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
665
  • 665
97.78
  • 97.78
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.53e3
  • 1.53e3
94.89
  • 94.89
AEIR
  • AEIR
UBERON:0003923dorsal pancreatic bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
3.73e3
  • 3.73e3
  • 1.12e4
87.50
  • 87.50
  • 62.49
AEIR
  • AEIR
  • AEIR
CL:0000502type D enteroendocrine cell
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000035Larval:Protruding-mouth
4.98e3
  • 4.98e3
  • 1.49e4
83.34
  • 83.34
  • 50.00
AEIR
  • AEIR
  • AEIR
CL:0000172somatostatin secreting cell
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
4.98e3
  • 4.98e3
  • 7.47e3
83.34
  • 83.34
  • 75.00
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
5.03e3
  • 5.03e3
  • 9.76e3
  • 1.35e4
83.16
  • 83.16
  • 67.32
  • 54.78
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003922pancreatic epithelial bud
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
6.22e3
  • 6.22e3
  • 1.07e4
  • 1.33e4
  • 1.36e4
79.16
  • 79.16
  • 64.28
  • 55.55
  • 54.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
6.35e3
  • 6.35e3
  • 6.48e3
  • 6.95e3
  • 7.73e3
  • 9.06e3
  • 1.27e4
  • 1.41e4
  • 1.78e4
78.74
  • 78.74
  • 78.30
  • 76.73
  • 74.12
  • 69.67
  • 57.42
  • 52.94
  • 40.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.23e3
  • 7.23e3
75.78
  • 75.78
AEIR
  • AEIR
UBERON:2000372interpeduncular nucleus medulla oblongata
  • ZFS:0000036Larval:Day 4
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:2001371pancreatic system
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000026Segmentation:14-19 somites
7.47e3
  • 7.47e3
  • 1.49e4
  • 1.49e4
75.00
  • 75.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000016endocrine pancreas
  • ZFS:0000035Larval:Protruding-mouth
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
8.96e3
  • 8.96e3
  • 8.96e3
  • 9.96e3
  • 9.96e3
  • 1.08e4
69.99
  • 69.99
  • 69.99
  • 66.65
  • 66.65
  • 63.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.00e4
  • 1.00e4
66.41
  • 66.41
AEIR
  • AEIR
UBERON:0001264pancreas
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
1.07e4
  • 1.07e4
  • 1.12e4
64.28
  • 64.28
  • 62.50
AEIR
  • AEIR
  • AEIR
UBERON:0003921pancreas primordium
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
1.09e4
  • 1.09e4
  • 1.33e4
  • 1.38e4
63.63
  • 63.63
  • 55.55
  • 53.83
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.83
  • 56.83
AEIR
  • AEIR
UBERON:0003079floor plate
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
1.29e4
  • 1.29e4
  • 1.31e4
  • 1.49e4
56.65
  • 56.65
  • 56.23
  • 49.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000104life cycle
  • ZFS:0000036Larval:Day 4
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
1.38e4
  • 1.38e4
  • 1.40e4
  • 1.43e4
  • 1.50e4
  • 1.50e4
  • 1.78e4
  • 1.79e4
  • 1.83e4
53.77
  • 53.77
  • 53.29
  • 52.01
  • 49.92
  • 49.61
  • 40.38
  • 40.18
  • 38.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002145interpeduncular nucleus
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.54e4
  • 1.54e4
48.56
  • 48.56
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.67e4
  • 1.67e4
44.13
  • 44.13
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
1.72e4
  • 1.72e4
42.27
  • 42.27
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
41.56
  • 41.56
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.52
  • 36.52
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.91e4
  • 1.91e4
35.92
  • 35.92
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.02e4
  • 2.02e4
32.21
  • 32.21
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
31.99
  • 31.99
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.07e4
  • 2.07e4
  • 2.13e4
30.85
  • 30.85
  • 28.56
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.31e4
  • 2.31e4
22.51
  • 22.51
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.36e4
  • 2.36e4
20.93
  • 20.93
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.59e4
  • 2.59e4
13.14
  • 13.14
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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