D. rerio Gene: zgc:55413 - ENSDARG00000014208 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000014208
Namezgc:55413
Descriptionzgc:55413 [Source:ZFIN;Acc:ZDB-GENE-040426-2909]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fc23c11, wu:fi06h07
Orthologs(s)5 orthologs
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
46.0
  • 46.0
99.85
  • 99.85
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
54.2
  • 54.2
99.82
  • 99.82
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
152
  • 152
  • 339
  • 865
  • 968
  • 4.22e3
99.49
  • 99.49
  • 98.87
  • 97.11
  • 96.76
  • 85.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
546
  • 546
98.18
  • 98.18
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
942
  • 942
  • 5.65e3
  • 6.73e3
  • 7.02e3
  • 9.23e3
  • 9.55e3
96.85
  • 96.85
  • 81.07
  • 77.46
  • 76.49
  • 69.09
  • 68.03
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
956
  • 956
96.80
  • 96.80
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
990
  • 990
96.69
  • 96.69
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.35e3
  • 2.35e3
92.12
  • 92.12
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.93e3
  • 2.93e3
90.19
  • 90.19
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000068embryo stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000066fully formed stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
4.69e3
  • 4.69e3
  • 9.58e3
  • 1.13e4
  • 1.18e4
  • 1.25e4
  • 1.28e4
  • 1.36e4
  • 1.42e4
  • 1.43e4
  • 1.49e4
  • 1.53e4
  • 1.58e4
  • 1.60e4
84.29
  • 84.29
  • 67.93
  • 62.04
  • 60.59
  • 58.30
  • 57.21
  • 54.39
  • 52.47
  • 51.99
  • 50.13
  • 48.65
  • 46.99
  • 46.45
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.89e3
  • 4.89e3
83.64
  • 83.64
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.44e3
  • 8.44e3
71.74
  • 71.74
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
8.77e3
  • 8.77e3
70.62
  • 70.62
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
8.83e3
  • 8.83e3
  • 1.50e4
70.43
  • 70.43
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.44e3
  • 9.44e3
68.41
  • 68.41
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.30
  • 64.30
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.16e4
  • 1.16e4
61.29
  • 61.29
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.19e4
  • 1.19e4
60.11
  • 60.11
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.21
  • 59.21
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.27e4
  • 1.27e4
57.49
  • 57.49
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.36e4
  • 1.36e4
  • 1.37e4
  • 1.45e4
  • 1.47e4
  • 1.48e4
  • 1.97e4
  • 2.07e4
  • 2.16e4
54.41
  • 54.41
  • 54.05
  • 51.59
  • 50.75
  • 50.53
  • 34.14
  • 30.58
  • 27.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.56
  • 49.56
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
  • 1.87e4
44.93
  • 44.93
  • 37.46
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.55
  • 44.55
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
  • 1.84e4
42.94
  • 42.94
  • 38.27
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.66
  • 42.66
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.80e4
  • 1.80e4
  • 1.88e4
  • 2.01e4
39.79
  • 39.79
  • 37.18
  • 32.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
39.06
  • 39.06
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.94e4
  • 1.94e4
  • 1.94e4
35.10
  • 35.10
  • 35.06
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.26e4
  • 2.26e4
24.48
  • 24.48
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Bilateria5 species5 genesCompare expression

Orthology information comes from OMA : ENSDARG00000014208.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Clupeocephala3 genesCompare expression
Bilateria5 genesCompare expression
Eukaryota6 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000014208.

Cross-references

EnsemblENSDARG00000014208 (zgc:55413)
ZFINZDB-GENE-040426-2909 (zgc:55413)
EMBLCR387932
Uniprot/SPTREMBLE7FDM7, E7FDM7_DANRE, F1QGD8, F1QGD8_DANRE, F1RA79, F1RA79_DANRE

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