D. rerio Gene: spaw - ENSDARG00000014309 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000014309
Namespaw
Descriptionsouthpaw [Source:ZFIN;Acc:ZDB-GENE-030219-1]
OrganismDanio rerio (zebrafish)
Synonym(s)ndr3, unm s457, unm t30973, unm_s457, unm_t30973

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0003081lateral plate mesoderm
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.64e3
  • 1.64e3
  • 1.85e3
  • 2.11e3
  • 9.86e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000001Kupffer's vesicle
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
1.85e3
  • 1.85e3
  • 5.69e3
  • 1.25e4
AEIR
  • AEIR
  • AEIR
  • AEIR
ZFA:0001065lateral mesoderm (Danio)
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
3.70e3
  • 3.70e3
  • 4.93e3
  • 1.48e4
  • 1.48e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
4.93e3
  • 4.93e3
  • 6.48e3
  • 1.76e4
  • 1.77e4
  • 1.77e4
  • 1.80e4
  • 1.82e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002533post-anal tail bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
1.01e4
  • 1.01e4
  • 1.08e4
  • 1.32e4
  • 1.32e4
  • 1.40e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000033intermediate cell mass of mesoderm
  • ZFS:0000033Hatching:Long-pec
1.11e4
  • 1.11e4
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
1.15e4
  • 1.15e4
  • 1.34e4
  • 1.35e4
  • 1.67e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009910posterior lateral plate mesoderm
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
1.27e4
  • 1.27e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
UBERON:0003084heart primordium
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000026Segmentation:14-19 somites
1.29e4
  • 1.29e4
  • 1.39e4
AEIR
  • AEIR
  • AEIR
ZFA:0000003adaxial cell (Danio)
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
1.31e4
  • 1.31e4
  • 1.32e4
AEIR
  • AEIR
  • AEIR
UBERON:0009881anterior lateral plate mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.48e4
  • 1.48e4
AEIR
  • AEIR
UBERON:2007031anterior neural rod
  • ZFS:0000024Segmentation:5-9 somites
1.48e4
  • 1.48e4
AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000025Segmentation:10-13 somites
1.48e4
  • 1.48e4
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.64e4
  • 1.64e4
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
1.74e4
  • 1.74e4
  • 1.77e4
  • 1.77e4
  • 1.88e4
  • 2.04e4
  • 2.06e4
  • 2.43e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
1.78e4
  • 1.78e4
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.30e4
  • 2.30e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EnsemblENSDARG00000014309 (spaw)
Uniprot/SPTREMBLF1QX69, F1QX69_DANRE
ZFINZDB-GENE-030219-1 (spaw)

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