D. rerio Gene: spaw - ENSDARG00000014309 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000014309
Namespaw
Descriptionsouthpaw [Source:ZFIN;Acc:ZDB-GENE-030219-1]
OrganismDanio rerio (zebrafish)
Synonym(s)ndr3, unm s457, unm t30973, unm_s457, unm_t30973

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003081lateral plate mesoderm
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.64e3
  • 1.64e3
  • 1.85e3
  • 2.11e3
  • 9.86e3
94.44615
  • 94.44615
  • 93.75168
  • 92.85884
  • 66.66666
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000001Kupffer's vesicle
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
1.85e3
  • 1.85e3
  • 5.69e3
  • 1.25e4
93.75168
  • 93.75168
  • 80.76417
  • 57.67708
AEIR
  • AEIR
  • AEIR
  • AEIR
ZFA:0001065lateral mesoderm (Danio)
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
3.70e3
  • 3.70e3
  • 4.93e3
  • 1.48e4
  • 1.48e4
  • 1.48e4
87.50170
  • 87.50170
  • 83.33503
  • 49.99831
  • 49.99324
  • 49.99324
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
4.93e3
  • 4.93e3
  • 6.48e3
  • 1.76e4
  • 1.77e4
  • 1.77e4
  • 1.80e4
  • 1.82e4
83.32827
  • 83.32827
  • 78.11654
  • 40.49306
  • 40.23240
  • 40.05343
  • 39.29189
  • 38.48958
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002533post-anal tail bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
1.01e4
  • 1.01e4
  • 1.08e4
  • 1.32e4
  • 1.32e4
  • 1.40e4
65.77088
  • 65.77088
  • 63.62621
  • 55.53188
  • 55.53188
  • 52.75244
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000033intermediate cell mass of mesoderm
  • ZFS:0000033Hatching:Long-pec
1.11e4
  • 1.11e4
62.49830
  • 62.49830
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
1.15e4
  • 1.15e4
  • 1.34e4
  • 1.35e4
  • 1.67e4
61.09084
  • 61.09084
  • 54.73317
  • 54.51503
  • 43.50691
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009910posterior lateral plate mesoderm
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
1.27e4
  • 1.27e4
  • 1.48e4
57.13609
  • 57.13609
  • 49.99324
AEIR
  • AEIR
  • AEIR
UBERON:0003084heart primordium
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000026Segmentation:14-19 somites
1.29e4
  • 1.29e4
  • 1.39e4
56.24156
  • 56.24156
  • 52.91751
AEIR
  • AEIR
  • AEIR
ZFA:0000003adaxial cell (Danio)
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
1.31e4
  • 1.31e4
  • 1.32e4
55.86038
  • 55.86038
  • 55.53188
AEIR
  • AEIR
  • AEIR
UBERON:0009881anterior lateral plate mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.48e4
  • 1.48e4
50.00169
  • 50.00169
AEIR
  • AEIR
UBERON:2007031anterior neural rod
  • ZFS:0000024Segmentation:5-9 somites
1.48e4
  • 1.48e4
49.99831
  • 49.99831
AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000025Segmentation:10-13 somites
1.48e4
  • 1.48e4
49.99662
  • 49.99662
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.64e4
  • 1.64e4
44.61018
  • 44.61018
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
1.74e4
  • 1.74e4
  • 1.77e4
  • 1.77e4
  • 1.88e4
  • 2.04e4
  • 2.06e4
  • 2.43e4
41.16749
  • 41.16749
  • 40.27188
  • 40.13929
  • 36.37136
  • 31.06653
  • 30.51561
  • 17.90421
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
40.64162
  • 40.64162
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
1.78e4
  • 1.78e4
39.71246
  • 39.71246
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.30e4
  • 2.30e4
22.41607
  • 22.41607
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EnsemblENSDARG00000014309 (spaw)
Uniprot/SPTREMBLF1QX69, F1QX69_DANRE
ZFINZDB-GENE-030219-1 (spaw)

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