Gene: athl1 - ENSDARG00000014311 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000014311
Name	athl1
Description	ATH1, acid trehalase-like 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-061103-319]
Organism	Danio rerio (zebrafish)
Synonym(s)	zgc:154078
Orthologs(s)	18 orthologs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	4.05e3 4.05e3	86.45 86.45	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	6.82e3 6.82e3	77.16 77.16	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages ZFS:0000036Larval:Day 4 UBERON:0000066fully formed stage	7.00e3 7.00e3 9.68e3	76.56 76.56 67.60	AEIR AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	7.15e3 7.15e3	76.07 76.07	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000066fully formed stage	7.65e3 7.65e3	74.38 74.38	AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000015Blastula:Dome ZFS:0000011Blastula:1k-cell	8.03e3 8.03e3 8.13e3	73.13 73.13 72.77	AEIR AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	8.63e3 8.63e3	71.10 71.10	AEIR AEIR
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000019Gastrula:Shield ZFS:0000022Gastrula:Bud	8.86e3 8.86e3 1.52e4	70.32 70.32 49.10	AEIR AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	9.19e3 9.19e3	69.25 69.25	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	9.30e3 9.30e3	68.87 68.87	AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	1.05e4 1.05e4	64.99 64.99	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	1.05e4 1.05e4	64.99 64.99	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages ZFS:0000029Pharyngula:Prim-5 UBERON:0004707pharyngula stage UBERON:0000068embryo stage ZFS:0000033Hatching:Long-pec ZFS:0000037Larval:Day 5	1.09e4 1.09e4 1.18e4 1.42e4 1.45e4 1.46e4	63.53 63.53 60.64 52.48 51.58 51.27	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	1.20e4 1.20e4	59.95 59.95	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	1.20e4 1.20e4	59.91 59.91	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	1.22e4 1.22e4	59.22 59.22	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	1.22e4 1.22e4	59.16 59.16	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages UBERON:0000069larval stage ZFS:0000037Larval:Day 5	1.24e4 1.24e4 1.55e4	58.50 58.50 48.16	AEIR AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	1.29e4 1.29e4	56.90 56.90	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	1.34e4 1.34e4	55.02 55.02	AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	1.44e4 1.44e4	51.83 51.83	AEIR AEIR
UBERON:0000033	head	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000066fully formed stage	1.59e4 1.59e4 1.76e4	46.59 46.59 40.92	AEIR AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	1.65e4 1.65e4	44.92 44.92	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

EST data: Bgee
RNA-Seq data: Bgee

Sources of raw data:

EST data: UniGene
RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	12 species Homo sapiens (human) Mus musculus (mouse) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	12 genes ENSG00000142102 ATHL1 ENSMUSG00000062031 Athl1 ENSMMUG00000004625 ATHL1 ENSRNOG00000014783 Athl1 ENSBTAG00000016722 ATHL1 ENSSSCG00000025023 ENSCAFG00000006474 ATHL1 ENSFCAG00000013887 ATHL1 ENSCPOG00000024114 ATHL1 ENSGALG00000004234 ATHL1 ENSACAG00000017476 ATHL1 ENSXETG00000020609 athl1	Compare expression	[+]
Bilateria	18 species Homo sapiens (human) Mus musculus (mouse) Drosophila melanogaster (fruit fly) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog) Drosophila ananassae Drosophila mojavensis Drosophila simulans Drosophila virilis Drosophila yakuba	18 genes ENSG00000142102 ATHL1 ENSMUSG00000062031 Athl1 FBgn0032387 CG16965 ENSMMUG00000004625 ATHL1 ENSRNOG00000014783 Athl1 ENSBTAG00000016722 ATHL1 ENSSSCG00000025023 ENSCAFG00000006474 ATHL1 ENSFCAG00000013887 ATHL1 ENSCPOG00000024114 ATHL1 ENSGALG00000004234 ATHL1 ENSACAG00000017476 ATHL1 ENSXETG00000020609 athl1 FBgn0098627 GF21627 FBgn0147525 GI24803 FBgn0195171 GD23801 FBgn0209629 GJ22522 FBgn0235965 GE18556	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000014311.

Cross-references

Ensembl	ENSDARG00000014311 (athl1)
ZFIN	ZDB-GENE-061103-319 (athl1)
EMBL	FP102921
Uniprot/SPTREMBL	F1Q6T5, F1Q6T5_DANRE