D. rerio Gene: atp5j - ENSDARG00000014313 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000014313
Nameatp5j
DescriptionATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6 [Source:ZFIN;Acc:ZDB-GENE-040426-2534]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fa66e04, zgc:77541
Orthologs(s)23 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
102
  • 102
99.66
  • 99.66
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
222
  • 222
99.26
  • 99.26
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
238
  • 238
99.21
  • 99.21
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
242
  • 242
  • 327
  • 1.21e4
99.19
  • 99.19
  • 98.91
  • 59.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
251
  • 251
99.16
  • 99.16
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
255
  • 255
99.15
  • 99.15
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
347
  • 347
  • 394
  • 431
  • 454
  • 480
  • 496
  • 739
  • 855
  • 907
  • 1.17e3
98.84
  • 98.84
  • 98.68
  • 98.56
  • 98.48
  • 98.40
  • 98.34
  • 97.53
  • 97.14
  • 96.97
  • 96.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
349
  • 349
98.83
  • 98.83
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
350
  • 350
  • 436
  • 798
  • 1.31e3
98.83
  • 98.83
  • 98.54
  • 97.33
  • 95.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
395
  • 395
98.68
  • 98.68
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
432
  • 432
98.56
  • 98.56
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
435
  • 435
98.55
  • 98.55
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
461
  • 461
  • 539
98.46
  • 98.46
  • 98.20
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
464
  • 464
  • 554
  • 596
98.45
  • 98.45
  • 98.15
  • 98.01
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
469
  • 469
98.43
  • 98.43
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
488
  • 488
  • 547
  • 1.45e4
98.37
  • 98.37
  • 98.17
  • 51.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
571
  • 571
98.09
  • 98.09
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
576
  • 576
98.07
  • 98.07
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
662
  • 662
97.79
  • 97.79
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
708
  • 708
97.63
  • 97.63
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
746
  • 746
97.51
  • 97.51
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
755
  • 755
  • 769
  • 854
  • 868
  • 951
  • 982
  • 1.02e3
  • 1.90e3
  • 2.26e3
  • 3.47e3
  • 3.48e3
  • 3.92e3
  • 5.74e3
  • 8.93e3
  • 1.44e4
  • 1.47e4
  • 1.47e4
97.47
  • 97.47
  • 97.43
  • 97.14
  • 97.10
  • 96.82
  • 96.71
  • 96.58
  • 93.66
  • 92.43
  • 88.37
  • 88.33
  • 86.88
  • 80.77
  • 70.11
  • 51.82
  • 50.90
  • 50.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
777
  • 777
97.40
  • 97.40
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
873
  • 873
97.08
  • 97.08
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
887
  • 887
  • 1.11e3
97.03
  • 97.03
  • 96.28
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.06e3
  • 1.06e3
96.44
  • 96.44
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
1.10e3
  • 1.10e3
  • 2.24e3
  • 2.51e3
  • 2.53e3
  • 3.39e3
  • 3.63e3
96.32
  • 96.32
  • 92.49
  • 91.59
  • 91.54
  • 88.65
  • 87.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.15e3
  • 1.15e3
96.14
  • 96.14
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.15e3
  • 2.15e3
92.80
  • 92.80
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.31e3
  • 4.31e3
85.57
  • 85.57
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
4.90e3
  • 4.90e3
  • 5.89e3
  • 6.28e3
  • 7.40e3
  • 8.78e3
83.59
  • 83.59
  • 80.29
  • 78.98
  • 75.22
  • 70.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.04e3
  • 7.04e3
76.43
  • 76.43
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.39e3
  • 8.39e3
71.91
  • 71.91
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
9.54e3
  • 9.54e3
68.05
  • 68.05
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
  • 1.50e4
57.14
  • 57.14
  • 49.94
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species17 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSDARG00000014313.

Cross-references

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