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D. rerio Gene: rab11al - ENSDARG00000014340 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000014340
Namerab11al
DescriptionRAB11a, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-031118-188]
OrganismDanio rerio (zebrafish)
Synonym(s)fc54g10, wu:fc54g10, zgc:63565
Orthologs(s)8 orthologs
Paralog(s)100 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.11e3
  • 3.11e3
89.60
  • 89.60
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.20e3
  • 3.20e3
89.30
  • 89.30
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
3.47e3
  • 3.47e3
  • 1.47e4
88.38
  • 88.38
  • 50.63
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.78e3
  • 3.78e3
87.35
  • 87.35
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
4.64e3
  • 4.64e3
  • 1.73e4
84.47
  • 84.47
  • 41.97
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.83e3
  • 4.83e3
83.82
  • 83.82
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.56e3
  • 6.56e3
78.03
  • 78.03
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
7.63e3
  • 7.63e3
  • 1.13e4
  • 1.16e4
  • 1.74e4
74.47
  • 74.47
  • 62.22
  • 61.08
  • 41.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
7.67e3
  • 7.67e3
  • 8.33e3
  • 8.52e3
  • 9.72e3
  • 1.26e4
  • 1.27e4
  • 1.45e4
  • 1.51e4
  • 1.75e4
  • 1.78e4
74.32
  • 74.32
  • 72.11
  • 71.47
  • 67.44
  • 57.97
  • 57.61
  • 51.55
  • 49.50
  • 41.29
  • 40.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.14e3
  • 8.14e3
72.76
  • 72.76
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.11e3
  • 9.11e3
69.49
  • 69.49
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
9.64e3
  • 9.64e3
67.73
  • 67.73
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
1.13e4
  • 1.13e4
  • 1.32e4
  • 1.40e4
  • 1.68e4
  • 1.75e4
62.18
  • 62.18
  • 55.81
  • 53.02
  • 43.69
  • 41.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.11
  • 62.11
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • ZFS:0000049segmentation
  • UBERON:0000104life cycle
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000036Larval:Day 4
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
1.19e4
  • 1.19e4
  • 1.46e4
  • 1.47e4
  • 1.49e4
  • 1.50e4
  • 1.66e4
  • 1.70e4
  • 1.77e4
  • 1.78e4
  • 1.78e4
  • 1.78e4
  • 1.78e4
  • 1.79e4
  • 1.80e4
  • 1.81e4
  • 1.83e4
  • 1.83e4
  • 1.84e4
60.00
  • 60.00
  • 51.01
  • 50.68
  • 49.95
  • 49.92
  • 44.26
  • 43.20
  • 40.62
  • 40.56
  • 40.43
  • 40.38
  • 40.38
  • 40.18
  • 39.85
  • 39.42
  • 38.72
  • 38.62
  • 38.44
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.20e4
  • 1.20e4
59.74
  • 59.74
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.88
  • 58.88
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.04
  • 58.04
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.85
  • 57.85
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
  • 1.35e4
56.35
  • 56.35
  • 54.76
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
  • 1.50e4
55.70
  • 55.70
  • 49.92
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.30
  • 53.30
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.41e4
  • 1.41e4
52.93
  • 52.93
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.44e4
  • 1.44e4
  • 1.52e4
  • 1.76e4
51.69
  • 51.69
  • 49.19
  • 41.15
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.44
  • 48.44
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
  • 1.82e4
45.48
  • 45.48
  • 38.94
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.64e4
  • 1.64e4
45.25
  • 45.25
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
  • 2.04e4
45.01
  • 45.01
  • 31.53
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Orthology information comes from OMA : ENSDARG00000014340.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria3 genesCompare expression
Opisthokonta23 genesCompare expression
Eukaryota100 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000014340.

Cross-references

EnsemblENSDARG00000014340 (rab11al)
ZFINZDB-GENE-031118-188 (rab11al)
EMBLCU571383
Uniprot/SPTREMBLF1RDZ1, F1RDZ1_DANRE

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