D. rerio Gene: ddx4 - ENSDARG00000014373 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000014373
Nameddx4
DescriptionDEAD (Asp-Glu-Ala-Asp) box polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-990415-272]
OrganismDanio rerio (zebrafish)
Synonym(s)vas, vasa, vasa {eco:0000313|embl:aal89410.1,gn eco:0000313|ensembl:ensdarp00000125001}, vlg, wu:fi24g05, zgc:109812, zgc:158535

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • ZFS:0000041Larval:Days 21-29
202
  • 202
  • 1.48e4
99.32123
  • 99.32123
  • 50.00000
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
627
  • 627
97.88410
  • 97.88410
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000041Larval:Days 21-29
996
  • 996
  • 4.93e3
  • 1.48e4
96.63560
  • 96.63560
  • 83.33503
  • 50.00000
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.40e3
  • 1.40e3
95.26811
  • 95.26811
AEIR
  • AEIR
CL:0000670primordial germ cell
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000015Blastula:Dome
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000039Larval:Days 7-13
  • ZFS:0000041Larval:Days 21-29
1.64e3
  • 1.64e3
  • 2.11e3
  • 2.96e3
  • 4.23e3
  • 4.93e3
  • 4.93e3
  • 5.92e3
  • 5.92e3
  • 5.92e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 9.25e3
  • 9.25e3
  • 1.11e4
  • 1.18e4
  • 1.18e4
  • 1.48e4
  • 1.48e4
94.44615
  • 94.44615
  • 92.85884
  • 90.00169
  • 85.71430
  • 83.33503
  • 83.33334
  • 80.00000
  • 80.00000
  • 80.00000
  • 75.00167
  • 75.00167
  • 75.00167
  • 74.99829
  • 68.74493
  • 68.74493
  • 62.49830
  • 59.99662
  • 59.99662
  • 50.00169
  • 50.00169
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
1.76e3
  • 1.76e3
  • 1.93e3
  • 2.89e3
  • 4.36e3
  • 8.72e3
94.03924
  • 94.03924
  • 93.46513
  • 90.23693
  • 85.25608
  • 70.53474
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
1.86e3
  • 1.86e3
  • 3.95e3
  • 4.45e3
93.70054
  • 93.70054
  • 86.65195
  • 84.95686
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:00072334 cell stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000014Blastula:Sphere
2.11e3
  • 2.11e3
  • 9.05e3
  • 9.87e3
92.85884
  • 92.85884
  • 69.42923
  • 66.65990
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.47e3
  • 2.47e3
91.65160
  • 91.65160
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.66e3
  • 2.66e3
91.01955
  • 91.01955
AEIR
  • AEIR
CL:0000039germ line cell
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000041Larval:Days 21-29
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000029Pharyngula:Prim-5
3.70e3
  • 3.70e3
  • 7.40e3
  • 7.40e3
  • 1.48e4
  • 1.48e4
87.50170
  • 87.50170
  • 75.00167
  • 75.00167
  • 50.00169
  • 50.00169
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005564gonad primordium
  • ZFS:0000039Larval:Days 7-13
  • ZFS:0000037Larval:Day 5
3.70e3
  • 3.70e3
  • 1.48e4
87.50170
  • 87.50170
  • 50.00169
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.36e3
  • 4.36e3
85.26017
  • 85.26017
AEIR
  • AEIR
UBERON:0004749blastodisc
  • UBERON:00072334 cell stage
  • UBERON:0000106zygote stage
  • UBERON:00072322 cell stage
4.93e3
  • 4.93e3
  • 7.40e3
  • 1.48e4
83.33503
  • 83.33503
  • 75.00167
  • 50.00169
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2005272immature gonad
  • ZFS:0000041Larval:Days 21-29
  • ZFS:0000040Larval:Days 14-20
4.93e3
  • 4.93e3
  • 5.92e3
83.33503
  • 83.33503
  • 80.00000
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.95e3
  • 4.95e3
83.27616
  • 83.27616
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000066fully formed stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
5.25e3
  • 5.25e3
  • 5.84e3
  • 7.59e3
  • 8.91e3
  • 1.12e4
  • 1.36e4
  • 1.36e4
  • 1.44e4
  • 1.49e4
  • 1.52e4
  • 1.53e4
  • 1.56e4
  • 1.61e4
  • 1.62e4
  • 1.63e4
82.26045
  • 82.26045
  • 80.27643
  • 74.35179
  • 69.90436
  • 62.12926
  • 54.17376
  • 54.14474
  • 51.19342
  • 49.79382
  • 48.61822
  • 48.32244
  • 47.44469
  • 45.68970
  • 45.31776
  • 44.98489
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.74e3
  • 6.74e3
77.22610
  • 77.22610
AEIR
  • AEIR
UBERON:2001263ovarian follicle stage I
  • ZFS:0000042Juvenile:Days 30-44
7.40e3
  • 7.40e3
75.00167
  • 75.00167
AEIR
  • AEIR
ZFA:0000093blastomere (Danio)
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • UBERON:0000106zygote stage
  • UBERON:00072322 cell stage
7.40e3
  • 7.40e3
  • 7.40e3
  • 1.48e4
  • 1.48e4
  • 1.48e4
  • 1.48e4
  • 1.48e4
74.99998
  • 74.99998
  • 74.99998
  • 50.00169
  • 50.00169
  • 50.00000
  • 49.99831
  • 49.99831
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
8.56e3
  • 8.56e3
71.06325
  • 71.06325
AEIR
  • AEIR
CL:0000020spermatogonium
  • ZFS:0000041Larval:Days 21-29
1.48e4
  • 1.48e4
50.00169
  • 50.00169
AEIR
  • AEIR
UBERON:0000991gonad
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000043Juvenile:Days 45-89
  • ZFS:0000041Larval:Days 21-29
1.48e4
  • 1.48e4
  • 1.48e4
  • 1.48e4
50.00169
  • 50.00169
  • 50.00169
  • 50.00000
AEIR
  • AEIR
  • AEIR
  • AEIR
ZFA:0001570unfertilized egg (Danio)
  • UBERON:0000106zygote stage
1.48e4
  • 1.48e4
50.00169
  • 50.00169
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.02379
  • 49.02379
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.61e4
  • 1.61e4
45.58792
  • 45.58792
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
1.80e4
  • 1.80e4
39.18745
  • 39.18745
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
1.81e4
  • 1.81e4
  • 1.82e4
38.70448
  • 38.70448
  • 38.59057
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
31.32679
  • 31.32679
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.24e4
  • 2.24e4
24.38825
  • 24.38825
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

Do not show this banner again