D. rerio Gene: ddx4 - ENSDARG00000014373 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000014373
Nameddx4
DescriptionDEAD (Asp-Glu-Ala-Asp) box polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-990415-272]
OrganismDanio rerio (zebrafish)
Synonym(s)vas, vasa, vasa {eco:0000313|embl:aal89410.1,gn eco:0000313|ensembl:ensdarp00000125001}, vlg, wu:fi24g05, zgc:109812, zgc:158535

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • ZFS:0000041Larval:Days 21-29
202
  • 202
  • 1.48e4
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
627
  • 627
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000041Larval:Days 21-29
996
  • 996
  • 4.93e3
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.40e3
  • 1.40e3
AEIR
  • AEIR
CL:0000670primordial germ cell
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000015Blastula:Dome
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000039Larval:Days 7-13
  • ZFS:0000041Larval:Days 21-29
1.64e3
  • 1.64e3
  • 2.11e3
  • 2.96e3
  • 4.23e3
  • 4.93e3
  • 4.93e3
  • 5.92e3
  • 5.92e3
  • 5.92e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 9.25e3
  • 9.25e3
  • 1.11e4
  • 1.18e4
  • 1.18e4
  • 1.48e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
1.76e3
  • 1.76e3
  • 1.93e3
  • 2.89e3
  • 4.36e3
  • 8.72e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
1.86e3
  • 1.86e3
  • 3.95e3
  • 4.45e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:00072334 cell stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000014Blastula:Sphere
2.11e3
  • 2.11e3
  • 9.05e3
  • 9.87e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.47e3
  • 2.47e3
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.66e3
  • 2.66e3
AEIR
  • AEIR
CL:0000039germ line cell
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000041Larval:Days 21-29
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000029Pharyngula:Prim-5
3.70e3
  • 3.70e3
  • 7.40e3
  • 7.40e3
  • 1.48e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005564gonad primordium
  • ZFS:0000039Larval:Days 7-13
  • ZFS:0000037Larval:Day 5
3.70e3
  • 3.70e3
  • 1.48e4
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.36e3
  • 4.36e3
AEIR
  • AEIR
UBERON:0004749blastodisc
  • UBERON:00072334 cell stage
  • UBERON:0000106zygote stage
  • UBERON:00072322 cell stage
4.93e3
  • 4.93e3
  • 7.40e3
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2005272immature gonad
  • ZFS:0000041Larval:Days 21-29
  • ZFS:0000040Larval:Days 14-20
4.93e3
  • 4.93e3
  • 5.92e3
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.95e3
  • 4.95e3
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000066fully formed stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
5.25e3
  • 5.25e3
  • 5.84e3
  • 7.59e3
  • 8.91e3
  • 1.12e4
  • 1.36e4
  • 1.36e4
  • 1.44e4
  • 1.49e4
  • 1.52e4
  • 1.53e4
  • 1.56e4
  • 1.61e4
  • 1.62e4
  • 1.63e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.74e3
  • 6.74e3
AEIR
  • AEIR
UBERON:2001263ovarian follicle stage I
  • ZFS:0000042Juvenile:Days 30-44
7.40e3
  • 7.40e3
AEIR
  • AEIR
ZFA:0000093blastomere (Danio)
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • UBERON:0000106zygote stage
  • UBERON:00072322 cell stage
7.40e3
  • 7.40e3
  • 7.40e3
  • 1.48e4
  • 1.48e4
  • 1.48e4
  • 1.48e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
8.56e3
  • 8.56e3
AEIR
  • AEIR
CL:0000020spermatogonium
  • ZFS:0000041Larval:Days 21-29
1.48e4
  • 1.48e4
AEIR
  • AEIR
UBERON:0000991gonad
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000043Juvenile:Days 45-89
  • ZFS:0000041Larval:Days 21-29
1.48e4
  • 1.48e4
  • 1.48e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
ZFA:0001570unfertilized egg (Danio)
  • UBERON:0000106zygote stage
1.48e4
  • 1.48e4
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.61e4
  • 1.61e4
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
1.80e4
  • 1.80e4
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
1.81e4
  • 1.81e4
  • 1.82e4
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.24e4
  • 2.24e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLAF461759, BX571726, CU855689
EnsemblENSDARG00000014373 (ddx4)
Uniprot/SPTREMBLE7EZA2, E7EZA2_DANRE, F1QES3, F1QES3_DANRE, F1QSP5, F1QSP5_DANRE, F1R6M3, F1R6M3_DANRE, F8W3U8, F8W3U8_DANRE, F8W4P0, F8W4P0_DANRE, Q8QGG8, Q8QGG8_DANRE
ZFINZDB-GENE-990415-272 (ddx4)

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