D. rerio Gene: galnt6 - ENSDARG00000014386 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000014386
Namegalnt6
DescriptionUDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6) [Source:ZFIN;Acc:ZDB-GENE-040426-2272]
OrganismDanio rerio (zebrafish)
Synonym(s)fc23d02, fc56f12, wu:fc23d02, wu:fc56f12, zgc:77836

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.30e3
  • 1.30e3
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.75e3
  • 1.75e3
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.98e3
  • 2.98e3
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
3.02e3
  • 3.02e3
  • 3.72e3
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.37e3
  • 4.37e3
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.63e3
  • 4.63e3
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
4.70e3
  • 4.70e3
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.10e3
  • 5.10e3
  • 1.85e4
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.20e3
  • 5.20e3
AEIR
  • AEIR
UBERON:0008904neuromast
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
5.29e3
  • 5.29e3
  • 6.17e3
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.64e3
  • 5.64e3
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.65e3
  • 5.65e3
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.69e3
  • 5.69e3
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.13e3
  • 6.13e3
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
6.15e3
  • 6.15e3
  • 6.18e3
  • 7.28e3
  • 8.03e3
  • 8.29e3
  • 9.46e3
  • 9.47e3
  • 1.13e4
  • 1.23e4
  • 1.43e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
6.40e3
  • 6.40e3
  • 7.19e3
  • 7.67e3
  • 8.03e3
  • 9.08e3
  • 9.51e3
  • 9.76e3
  • 9.87e3
  • 9.96e3
  • 1.04e4
  • 1.07e4
  • 1.08e4
  • 1.09e4
  • 1.10e4
  • 1.15e4
  • 1.16e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002538hatching gland
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
6.58e3
  • 6.58e3
  • 7.89e3
  • 8.07e3
  • 8.22e3
  • 8.63e3
  • 9.11e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
6.87e3
  • 6.87e3
  • 7.21e3
  • 8.60e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
7.06e3
  • 7.06e3
  • 7.25e3
  • 8.69e3
  • 8.79e3
  • 1.11e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
7.97e3
  • 7.97e3
  • 9.16e3
  • 9.58e3
  • 9.62e3
  • 9.87e3
  • 9.87e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001042chordate pharynx
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
8.14e3
  • 8.14e3
  • 8.22e3
AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
8.33e3
  • 8.33e3
  • 8.71e3
AEIR
  • AEIR
  • AEIR
UBERON:0003055periderm
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
8.33e3
  • 8.33e3
  • 8.46e3
  • 8.46e3
  • 8.46e3
  • 8.46e3
  • 8.46e3
  • 8.46e3
  • 8.88e3
  • 8.88e3
  • 9.05e3
  • 9.58e3
  • 9.87e3
  • 9.87e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007383enveloping layer of ectoderm
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
9.42e3
  • 9.42e3
  • 9.42e3
  • 9.87e3
  • 1.04e4
  • 1.04e4
  • 1.04e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001003skin epidermis
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
9.58e3
  • 9.58e3
  • 1.02e4
AEIR
  • AEIR
  • AEIR
UBERON:2000058polster
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
9.87e3
  • 9.87e3
  • 9.87e3
  • 1.04e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
  • 1.26e4
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.12e4
  • 1.12e4
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.15e4
  • 1.15e4
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.17e4
  • 1.17e4
  • 1.26e4
  • 1.28e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
1.19e4
  • 1.19e4
  • 1.41e4
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.21e4
  • 1.21e4
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.35e4
  • 1.35e4
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.86e4
  • 1.86e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC067340, CR774183, CR855310
EnsemblENSDARG00000014386 (galnt6)
Uniprot/SPTREMBLE9QHU2, E9QHU2_DANRE, Q6NX01, Q6NX01_DANRE
ZFINZDB-GENE-040426-2272 (galnt6)

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