D. rerio Gene: galnt6 - ENSDARG00000014386 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000014386
Namegalnt6
DescriptionUDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6) [Source:ZFIN;Acc:ZDB-GENE-040426-2272]
OrganismDanio rerio (zebrafish)
Synonym(s)fc23d02, fc56f12, wu:fc23d02, wu:fc56f12, zgc:77836

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.30e3
  • 1.30e3
95.65
  • 95.65
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.75e3
  • 1.75e3
94.15
  • 94.15
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.98e3
  • 2.98e3
90.03
  • 90.03
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
3.04e3
  • 3.04e3
  • 3.75e3
89.82
  • 89.82
  • 87.46
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
3.56e3
  • 3.56e3
  • 5.01e3
  • 6.92e3
  • 7.26e3
  • 8.67e3
88.10
  • 88.10
  • 83.24
  • 76.84
  • 75.69
  • 70.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.15e3
  • 4.15e3
86.10
  • 86.10
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
4.26e3
  • 4.26e3
  • 7.11e3
  • 7.79e3
  • 8.76e3
  • 8.86e3
  • 1.12e4
85.73
  • 85.73
  • 76.19
  • 73.91
  • 70.68
  • 70.35
  • 62.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.37e3
  • 4.37e3
85.39
  • 85.39
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.42e3
  • 4.42e3
85.21
  • 85.21
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
4.74e3
  • 4.74e3
84.14
  • 84.14
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.10e3
  • 5.10e3
  • 1.85e4
82.94
  • 82.94
  • 37.98
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.20e3
  • 5.20e3
82.59
  • 82.59
AEIR
  • AEIR
UBERON:0008904neuromast
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
5.34e3
  • 5.34e3
  • 6.22e3
82.14
  • 82.14
  • 79.16
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.64e3
  • 5.64e3
81.13
  • 81.13
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.65e3
  • 5.65e3
81.09
  • 81.09
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.70e3
  • 5.70e3
80.92
  • 80.92
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.13e3
  • 6.13e3
79.48
  • 79.48
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
6.15e3
  • 6.15e3
  • 6.20e3
  • 7.69e3
  • 8.09e3
  • 8.35e3
  • 9.53e3
  • 9.53e3
  • 1.14e4
  • 1.23e4
  • 1.43e4
79.43
  • 79.43
  • 79.26
  • 74.24
  • 72.92
  • 72.03
  • 68.09
  • 68.08
  • 61.79
  • 58.83
  • 51.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.25e3
  • 6.25e3
79.07
  • 79.07
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
6.44e3
  • 6.44e3
  • 7.24e3
  • 7.73e3
  • 8.08e3
  • 9.14e3
  • 9.58e3
  • 9.83e3
  • 9.96e3
  • 1.00e4
  • 1.05e4
  • 1.08e4
  • 1.09e4
  • 1.09e4
  • 1.11e4
  • 1.16e4
  • 1.17e4
78.43
  • 78.43
  • 75.75
  • 74.12
  • 72.93
  • 69.40
  • 67.94
  • 67.07
  • 66.66
  • 66.42
  • 64.99
  • 63.98
  • 63.42
  • 63.34
  • 62.86
  • 61.08
  • 60.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002538hatching gland
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
6.64e3
  • 6.64e3
  • 7.97e3
  • 8.15e3
  • 8.30e3
  • 8.71e3
  • 9.19e3
77.77
  • 77.77
  • 73.32
  • 72.72
  • 72.22
  • 70.82
  • 69.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
8.04e3
  • 8.04e3
  • 9.25e3
  • 9.67e3
  • 9.71e3
  • 9.96e3
  • 9.96e3
73.07
  • 73.07
  • 69.03
  • 67.63
  • 67.48
  • 66.65
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001042chordate pharynx
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
8.22e3
  • 8.22e3
  • 8.30e3
72.48
  • 72.48
  • 72.21
AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
8.40e3
  • 8.40e3
  • 8.79e3
71.86
  • 71.86
  • 70.57
AEIR
  • AEIR
  • AEIR
UBERON:0003055periderm
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
8.40e3
  • 8.40e3
  • 8.53e3
  • 8.53e3
  • 8.53e3
  • 8.53e3
  • 8.53e3
  • 8.53e3
  • 8.96e3
  • 8.96e3
  • 9.13e3
  • 9.67e3
  • 9.96e3
  • 9.96e3
71.86
  • 71.86
  • 71.43
  • 71.43
  • 71.43
  • 71.43
  • 71.43
  • 71.43
  • 69.99
  • 69.99
  • 69.43
  • 67.63
  • 66.65
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007383enveloping layer of ectoderm
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
9.51e3
  • 9.51e3
  • 9.51e3
  • 9.96e3
  • 1.05e4
  • 1.05e4
  • 1.05e4
68.17
  • 68.17
  • 68.17
  • 66.66
  • 64.99
  • 64.99
  • 64.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001003skin epidermis
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
9.67e3
  • 9.67e3
  • 1.03e4
67.63
  • 67.63
  • 65.61
AEIR
  • AEIR
  • AEIR
UBERON:2000058polster
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
9.96e3
  • 9.96e3
  • 9.96e3
  • 1.05e4
66.65
  • 66.65
  • 66.65
  • 64.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.27
  • 64.27
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
  • 1.16e4
63.87
  • 63.87
  • 61.07
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.13e4
  • 1.13e4
62.09
  • 62.09
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.15e4
  • 1.15e4
61.64
  • 61.64
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
1.17e4
  • 1.17e4
  • 1.18e4
  • 1.21e4
60.95
  • 60.95
  • 60.39
  • 59.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.73
  • 59.73
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
1.20e4
  • 1.20e4
  • 1.42e4
59.72
  • 59.72
  • 52.51
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.22e4
  • 1.22e4
59.06
  • 59.06
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.20
  • 57.20
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.36e4
  • 1.36e4
54.46
  • 54.46
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.28
  • 51.28
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
  • 1.85e4
39.93
  • 39.93
  • 38.06
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.86e4
  • 1.86e4
37.72
  • 37.72
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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