D. rerio Gene: slc5a6b - ENSDARG00000014599 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000014599
Nameslc5a6b
Descriptionsolute carrier family 5 (sodium/multivitamin and iodide cotransporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-050913-86]
OrganismDanio rerio (zebrafish)
Synonym(s)slc5a6, slc5a6 {eco:0000313|ensembl:ensdarp00000110412,gn eco:0000313|zfin:zdb-gene-050913-86}, wu:fa19f06, zgc:114067
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.03e3
  • 5.03e3
83.16
  • 83.16
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
6.59e3
  • 6.59e3
  • 7.57e3
  • 7.79e3
  • 8.60e3
  • 1.04e4
77.93
  • 77.93
  • 74.64
  • 73.93
  • 71.21
  • 65.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.15e3
  • 7.15e3
76.07
  • 76.07
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
7.21e3
  • 7.21e3
75.85
  • 75.85
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.44e3
  • 7.44e3
75.08
  • 75.08
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
8.85e3
  • 8.85e3
  • 1.41e4
  • 1.51e4
70.38
  • 70.38
  • 52.90
  • 49.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
9.55e3
  • 9.55e3
68.04
  • 68.04
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.62e3
  • 9.62e3
67.78
  • 67.78
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.66e3
  • 9.66e3
67.65
  • 67.65
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.00e4
  • 1.00e4
66.50
  • 66.50
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.01e4
  • 1.01e4
66.04
  • 66.04
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
1.03e4
  • 1.03e4
  • 1.51e4
  • 1.60e4
  • 1.60e4
  • 1.60e4
  • 1.61e4
  • 1.61e4
  • 1.61e4
  • 1.63e4
  • 1.63e4
  • 1.66e4
  • 1.67e4
  • 1.71e4
  • 1.72e4
65.49
  • 65.49
  • 49.55
  • 46.54
  • 46.48
  • 46.41
  • 46.24
  • 46.12
  • 46.12
  • 45.54
  • 45.34
  • 44.36
  • 44.22
  • 42.78
  • 42.35
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.43
  • 65.43
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
1.04e4
  • 1.04e4
  • 1.21e4
  • 1.49e4
  • 1.69e4
65.07
  • 65.07
  • 59.42
  • 50.18
  • 43.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.79
  • 63.79
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.14e4
  • 1.14e4
  • 1.26e4
61.81
  • 61.81
  • 57.86
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.32
  • 59.32
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.02
  • 59.02
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.31e4
  • 1.31e4
  • 1.36e4
55.98
  • 55.98
  • 54.55
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.26
  • 55.26
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.08
  • 55.08
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
1.38e4
  • 1.38e4
  • 1.40e4
  • 1.41e4
  • 1.44e4
  • 1.56e4
  • 1.59e4
  • 1.68e4
  • 1.70e4
  • 1.73e4
  • 1.96e4
53.63
  • 53.63
  • 52.98
  • 52.65
  • 51.79
  • 47.84
  • 46.73
  • 43.91
  • 43.23
  • 42.12
  • 34.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.17
  • 53.17
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.05
  • 53.05
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.41e4
  • 1.41e4
52.94
  • 52.94
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.42e4
  • 1.42e4
52.50
  • 52.50
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.31
  • 50.31
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
  • 1.57e4
49.81
  • 49.81
  • 47.34
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.61e4
  • 1.61e4
  • 1.71e4
  • 1.78e4
46.05
  • 46.05
  • 42.72
  • 40.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
45.98
  • 45.98
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.64e4
  • 1.64e4
45.19
  • 45.19
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
  • 2.06e4
43.09
  • 43.09
  • 31.05
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000014599.

Cross-references

EnsemblENSDARG00000014599 (slc5a6b)
ZFINZDB-GENE-050913-86 (slc5a6b)
EMBLBC171549, BX005321, CR626881
Uniprot/SPTREMBLB7ZVD9, B7ZVD9_DANRE, F1QBN1, F1QBN1_DANRE

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