D. rerio Gene: bckdhb - ENSDARG00000014676 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000014676
Namebckdhb
Descriptionbranched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:158777

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
363
  • 363
  • 1.47e3
  • 2.42e3
  • 3.33e3
  • 3.63e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
483
  • 483
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
643
  • 643
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
679
  • 679
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
980
  • 980
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.13e3
  • 1.13e3
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.29e3
  • 1.29e3
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.54e3
  • 1.54e3
  • 2.57e3
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.62e3
  • 1.62e3
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.92e3
  • 1.92e3
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.59e3
  • 2.59e3
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.64e3
  • 2.64e3
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.80e3
  • 2.80e3
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000027Segmentation:20-25 somites
  • UBERON:0000106zygote stage
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
2.89e3
  • 2.89e3
  • 4.71e3
  • 5.64e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.84e3
  • 7.84e3
  • 7.89e3
  • 7.89e3
  • 8.07e3
  • 8.07e3
  • 8.07e3
  • 8.07e3
  • 8.07e3
  • 8.07e3
  • 8.07e3
  • 8.07e3
  • 8.07e3
  • 8.07e3
  • 8.07e3
  • 8.07e3
  • 8.07e3
  • 8.07e3
  • 8.22e3
  • 8.46e3
  • 8.63e3
  • 8.63e3
  • 8.71e3
  • 9.87e3
  • 9.87e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
4.10e3
  • 4.10e3
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.62e3
  • 4.62e3
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.59e3
  • 5.59e3
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000014676 (bckdhb)
Uniprot/SPTREMBLE7FDU0, E7FDU0_DANRE, F8W368, F8W368_DANRE
ZFINZDB-GENE-030124-2 (bckdhb)

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