D. rerio Gene: acox1 - ENSDARG00000014727 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000014727
Nameacox1
Descriptionacyl-CoA oxidase 1, palmitoyl [Source:ZFIN;Acc:ZDB-GENE-041010-219]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fb59h12, zgc:114033, zgc:92584

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
609
  • 609
  • 1.23e4
97.94501
  • 97.94501
  • 58.32826
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
635
  • 635
  • 1.11e4
  • 1.27e4
  • 1.29e4
97.85704
  • 97.85704
  • 62.48309
  • 57.12595
  • 56.24156
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.69e3
  • 1.69e3
94.27780
  • 94.27780
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • UBERON:0000106zygote stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
1.83e3
  • 1.83e3
  • 2.07e3
  • 3.53e3
  • 4.53e3
  • 4.93e3
  • 6.48e3
  • 6.58e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.91e3
  • 6.97e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
  • 7.84e3
  • 8.77e3
  • 8.88e3
  • 8.88e3
  • 9.96e3
  • 1.09e4
  • 1.09e4
  • 1.18e4
  • 1.22e4
  • 1.22e4
  • 1.23e4
  • 1.23e4
  • 1.33e4
  • 1.42e4
  • 1.49e4
93.83371
  • 93.83371
  • 93.00864
  • 88.05862
  • 84.70213
  • 83.32826
  • 78.11654
  • 77.76763
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 76.65821
  • 76.46123
  • 74.99322
  • 74.99322
  • 74.98780
  • 73.51758
  • 70.37040
  • 69.98817
  • 69.98817
  • 66.33223
  • 63.13770
  • 63.09888
  • 60.21308
  • 58.92499
  • 58.62572
  • 58.38058
  • 58.28574
  • 55.04669
  • 51.88136
  • 49.79382
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
1.85e3
  • 1.85e3
  • 1.11e4
  • 1.23e4
93.74715
  • 93.74715
  • 62.49830
  • 58.51811
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.12e3
  • 2.12e3
92.84471
  • 92.84471
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.46e3
  • 2.46e3
91.70568
  • 91.70568
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
2.70e3
  • 2.70e3
90.87188
  • 90.87188
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
2.83e3
  • 2.83e3
  • 4.90e3
  • 6.06e3
  • 8.19e3
  • 1.02e4
  • 1.05e4
  • 1.10e4
  • 1.16e4
  • 1.26e4
  • 1.38e4
90.43168
  • 90.43168
  • 83.44808
  • 79.53648
  • 72.30832
  • 65.55862
  • 64.56095
  • 62.73280
  • 60.88030
  • 57.52289
  • 53.50271
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.14e3
  • 3.14e3
89.38705
  • 89.38705
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.49e3
  • 3.49e3
88.20746
  • 88.20746
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
3.75e3
  • 3.75e3
  • 4.41e3
  • 6.80e3
87.34058
  • 87.34058
  • 85.08134
  • 77.03392
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.01e3
  • 4.01e3
86.46004
  • 86.46004
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.09e3
  • 4.09e3
86.17478
  • 86.17478
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
4.34e3
  • 4.34e3
  • 5.83e3
  • 6.38e3
85.32975
  • 85.32975
  • 80.29578
  • 78.43690
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
5.09e3
  • 5.09e3
  • 8.65e3
  • 9.86e3
  • 1.18e4
  • 1.21e4
  • 1.35e4
82.80885
  • 82.80885
  • 70.75758
  • 66.66666
  • 59.98986
  • 59.07907
  • 54.53193
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
5.80e3
  • 5.80e3
  • 6.03e3
80.41571
  • 80.41571
  • 79.62545
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.11e3
  • 6.11e3
79.36559
  • 79.36559
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
7.16e3
  • 7.16e3
  • 8.35e3
  • 1.13e4
75.80390
  • 75.80390
  • 71.78504
  • 61.70909
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
7.40e3
  • 7.40e3
  • 1.48e4
75.00167
  • 75.00167
  • 50.00169
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.46e3
  • 7.46e3
74.80442
  • 74.80442
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.43e3
  • 9.43e3
68.13994
  • 68.13994
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.02e4
  • 1.02e4
65.55091
  • 65.55091
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
1.09e4
  • 1.09e4
  • 1.13e4
  • 1.23e4
  • 1.24e4
  • 1.27e4
63.21846
  • 63.21846
  • 61.96485
  • 58.41668
  • 58.12310
  • 57.13870
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.09e4
  • 1.09e4
62.99439
  • 62.99439
AEIR
  • AEIR
UBERON:2001076intestinal bulb
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
1.18e4
  • 1.18e4
  • 1.48e4
59.98986
  • 59.98986
  • 50.00000
AEIR
  • AEIR
  • AEIR
UBERON:0010312immature eye
  • ZFS:0000026Segmentation:14-19 somites
1.32e4
  • 1.32e4
55.53188
  • 55.53188
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
  • 1.48e4
55.16372
  • 55.16372
  • 49.93916
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.65e4
  • 1.65e4
44.38125
  • 44.38125
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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