D. rerio Gene: panx1b - ENSDARG00000014910 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000014910
Namepanx1b
Descriptionpannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-69i14.7
Orthologs(s)17 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
4.14e3
  • 4.14e3
  • 5.29e3
  • 8.04e3
  • 8.79e3
86.15
  • 86.15
  • 82.28
  • 73.08
  • 70.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
9.11e3
  • 9.11e3
  • 1.10e4
  • 1.29e4
  • 1.46e4
  • 1.50e4
  • 1.50e4
  • 1.64e4
  • 1.73e4
69.48
  • 69.48
  • 63.16
  • 56.87
  • 51.02
  • 49.92
  • 49.81
  • 45.20
  • 42.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
1.02e4
  • 1.02e4
  • 1.11e4
  • 1.23e4
  • 1.62e4
  • 1.62e4
  • 1.63e4
  • 1.69e4
65.85
  • 65.85
  • 62.88
  • 58.82
  • 45.77
  • 45.73
  • 45.32
  • 43.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
  • 1.34e4
63.64
  • 63.64
  • 55.26
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.18e4
  • 1.18e4
  • 1.18e4
  • 1.21e4
60.62
  • 60.62
  • 60.33
  • 59.46
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.18
  • 59.18
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
57.99
  • 57.99
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
  • 2.04e4
49.92
  • 49.92
  • 31.68
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
48.09
  • 48.09
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
  • 1.67e4
45.67
  • 45.67
  • 44.07
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.70e4
  • 1.70e4
42.96
  • 42.96
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
41.07
  • 41.07
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
39.49
  • 39.49
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.92e4
  • 1.92e4
35.71
  • 35.71
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.94e4
  • 1.94e4
34.96
  • 34.96
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000014910.

Cross-references

EnsemblENSDARG00000014910 (panx1b)
ZFINZDB-GENE-070705-192 (panx1b)
Uniprot/SPTREMBLF1QSR7, F1QSR7_DANRE

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