D. rerio Gene: lamp2 - ENSDARG00000014914 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000014914
Namelamp2
Descriptionlysosomal-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030729-9]
OrganismDanio rerio (zebrafish)
Synonym(s)fb14a06, sb:cb587, wu:fb14a06, zgc:103532
Orthologs(s)6 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
20.5
  • 20.5
  • 22.7
  • 33.5
  • 95.0
  • 231
99.93
  • 99.93
  • 99.93
  • 99.89
  • 99.69
  • 99.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
58.2
  • 58.2
99.81
  • 99.81
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000036Larval:Day 4
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0000109gastrula stage
  • ZFS:0000049segmentation
62.5
  • 62.5
  • 485
  • 992
  • 1.01e3
  • 1.45e3
  • 1.85e3
  • 1.88e3
  • 2.21e3
  • 2.62e3
  • 2.70e3
  • 3.29e3
  • 3.42e3
  • 3.93e3
  • 4.69e3
  • 5.12e3
  • 7.38e3
  • 1.19e4
  • 1.49e4
99.79
  • 99.79
  • 98.38
  • 96.68
  • 96.62
  • 95.15
  • 93.81
  • 93.71
  • 92.59
  • 91.22
  • 90.97
  • 88.98
  • 88.55
  • 86.83
  • 84.29
  • 82.85
  • 75.30
  • 60.00
  • 49.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
115
  • 115
99.62
  • 99.62
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
153
  • 153
99.49
  • 99.49
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
159
  • 159
99.47
  • 99.47
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
186
  • 186
  • 9.02e3
99.38
  • 99.38
  • 69.79
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
218
  • 218
99.27
  • 99.27
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
240
  • 240
99.20
  • 99.20
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
241
  • 241
  • 603
  • 747
  • 877
  • 881
  • 962
99.20
  • 99.20
  • 97.98
  • 97.50
  • 97.07
  • 97.05
  • 96.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
274
  • 274
99.09
  • 99.09
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
493
  • 493
98.35
  • 98.35
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
514
  • 514
98.28
  • 98.28
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
574
  • 574
98.08
  • 98.08
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
652
  • 652
97.82
  • 97.82
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
678
  • 678
97.73
  • 97.73
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
711
  • 711
  • 2.30e3
97.62
  • 97.62
  • 92.29
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
712
  • 712
97.62
  • 97.62
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
726
  • 726
  • 1.60e3
97.57
  • 97.57
  • 94.64
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
746
  • 746
  • 1.48e3
97.51
  • 97.51
  • 95.05
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
853
  • 853
97.15
  • 97.15
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
859
  • 859
97.13
  • 97.13
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
915
  • 915
96.94
  • 96.94
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
997
  • 997
  • 2.83e3
  • 6.26e3
  • 6.73e3
96.66
  • 96.66
  • 90.53
  • 79.04
  • 77.46
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.05e3
  • 1.05e3
  • 3.21e3
96.49
  • 96.49
  • 89.25
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.27e3
  • 1.27e3
  • 1.37e3
  • 1.55e3
  • 1.58e3
  • 1.66e3
  • 1.85e3
  • 2.16e3
  • 2.20e3
  • 2.29e3
  • 2.75e3
95.76
  • 95.76
  • 95.41
  • 94.82
  • 94.72
  • 94.45
  • 93.79
  • 92.78
  • 92.65
  • 92.34
  • 90.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.42e3
  • 1.42e3
  • 2.54e3
  • 3.13e3
95.25
  • 95.25
  • 91.48
  • 89.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.48e3
  • 1.48e3
95.04
  • 95.04
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.81e3
  • 1.81e3
  • 1.35e4
93.93
  • 93.93
  • 54.73
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.40e3
  • 3.40e3
88.62
  • 88.62
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
4.70e3
  • 4.70e3
84.27
  • 84.27
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.77e3
  • 7.77e3
73.97
  • 73.97
AEIR
  • AEIR
UBERON:2000088YSL
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
8.96e3
  • 8.96e3
  • 8.96e3
  • 8.96e3
  • 9.96e3
  • 1.12e4
  • 1.14e4
  • 1.14e4
  • 1.23e4
  • 1.26e4
  • 1.28e4
  • 1.28e4
  • 1.28e4
  • 1.28e4
69.99
  • 69.99
  • 69.99
  • 69.99
  • 66.65
  • 62.48
  • 61.75
  • 61.75
  • 58.80
  • 57.68
  • 57.13
  • 57.13
  • 57.13
  • 57.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
9.72e3
  • 9.72e3
67.46
  • 67.46
AEIR
  • AEIR
UBERON:0004535cardiovascular system
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.10e4
  • 1.10e4
  • 1.17e4
  • 1.17e4
  • 1.36e4
  • 1.36e4
63.32
  • 63.32
  • 60.70
  • 60.70
  • 54.53
  • 54.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005426lens vesicle
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
1.14e4
  • 1.14e4
  • 1.20e4
  • 1.21e4
61.75
  • 61.75
  • 59.98
  • 59.36
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001638vein
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.15e4
  • 1.15e4
  • 1.15e4
  • 1.20e4
  • 1.40e4
  • 1.40e4
61.53
  • 61.53
  • 61.53
  • 59.98
  • 53.10
  • 53.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Bilateria6 species6 genesCompare expression

Orthology information comes from OMA : ENSDARG00000014914.

Cross-references

Do not show this banner again