D. rerio Gene: tprkb - ENSDARG00000014941 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000014941
Nametprkb
DescriptionTp53rk binding protein [Source:ZFIN;Acc:ZDB-GENE-041114-68]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:101896
Orthologs(s)20 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
3.55e3
  • 3.55e3
  • 5.36e3
88.11
  • 88.11
  • 82.07
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.34e3
  • 4.34e3
85.48
  • 85.48
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.36e3
  • 4.36e3
85.40
  • 85.40
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.87e3
  • 4.87e3
83.69
  • 83.69
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
5.03e3
  • 5.03e3
  • 7.13e3
  • 7.67e3
  • 7.88e3
  • 9.28e3
83.17
  • 83.17
  • 76.14
  • 74.30
  • 73.61
  • 68.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
5.39e3
  • 5.39e3
  • 6.42e3
81.95
  • 81.95
  • 78.50
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
5.51e3
  • 5.51e3
  • 1.32e4
81.54
  • 81.54
  • 55.83
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.98e3
  • 5.98e3
  • 7.60e3
79.97
  • 79.97
  • 74.54
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
6.96e3
  • 6.96e3
76.70
  • 76.70
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.07e3
  • 7.07e3
76.32
  • 76.32
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.23e3
  • 7.23e3
75.78
  • 75.78
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.68e3
  • 7.68e3
74.29
  • 74.29
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
7.82e3
  • 7.82e3
  • 1.35e4
73.80
  • 73.80
  • 54.92
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.86e3
  • 7.86e3
73.67
  • 73.67
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.98e3
  • 7.98e3
73.28
  • 73.28
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.32e3
  • 8.32e3
72.14
  • 72.14
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.32e3
  • 8.32e3
72.13
  • 72.13
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.49e3
  • 8.49e3
71.59
  • 71.59
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
8.68e3
  • 8.68e3
70.94
  • 70.94
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.82e3
  • 8.82e3
70.45
  • 70.45
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.64e3
  • 9.64e3
67.73
  • 67.73
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.10e4
  • 1.10e4
63.04
  • 63.04
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.68
  • 58.68
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species19 genesCompare expression
Bilateria19 species20 genesCompare expression

Orthology information comes from OMA : ENSDARG00000014941.

Cross-references

EnsemblENSDARG00000014941 (tprkb)
ZFINZDB-GENE-041114-68 (tprkb)
EMBLCU855579
Uniprot/SPTREMBLF1QZ15, F1QZ15_DANRE

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