Gene: tprkb - ENSDARG00000014941 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000014941
Name	tprkb
Description	Tp53rk binding protein [Source:ZFIN;Acc:ZDB-GENE-041114-68]
Organism	Danio rerio (zebrafish)
Synonym(s)	zgc:101896
Orthologs(s)	20 orthologs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000019Gastrula:Shield ZFS:0000022Gastrula:Bud	3.55e3 3.55e3 5.36e3	88.11 88.11 82.07	AEIR AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	4.34e3 4.34e3	85.48 85.48	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	4.36e3 4.36e3	85.40 85.40	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	4.87e3 4.87e3	83.69 83.69	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages UBERON:0004707pharyngula stage ZFS:0000029Pharyngula:Prim-5 ZFS:0000037Larval:Day 5 ZFS:0000033Hatching:Long-pec UBERON:0000068embryo stage	5.03e3 5.03e3 7.13e3 7.67e3 7.88e3 9.28e3	83.17 83.17 76.14 74.30 73.61 68.94	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0002548	larva	[+] 2 stages UBERON:0000069larval stage ZFS:0000037Larval:Day 5	5.39e3 5.39e3 6.42e3	81.95 81.95 78.50	AEIR AEIR AEIR
UBERON:0000033	head	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000066fully formed stage	5.51e3 5.51e3 1.32e4	81.54 81.54 55.83	AEIR AEIR AEIR
UBERON:0000948	heart	[+] 2 stages ZFS:0000036Larval:Day 4 UBERON:0000066fully formed stage	5.98e3 5.98e3 7.60e3	79.97 79.97 74.54	AEIR AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	6.96e3 6.96e3	76.70 76.70	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	7.07e3 7.07e3	76.32 76.32	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	7.23e3 7.23e3	75.78 75.78	AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	7.68e3 7.68e3	74.29 74.29	AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000015Blastula:Dome ZFS:0000011Blastula:1k-cell	7.82e3 7.82e3 1.35e4	73.80 73.80 54.92	AEIR AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	7.86e3 7.86e3	73.67 73.67	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	7.98e3 7.98e3	73.28 73.28	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	8.32e3 8.32e3	72.14 72.14	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	8.32e3 8.32e3	72.13 72.13	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	8.49e3 8.49e3	71.59 71.59	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000066fully formed stage	8.68e3 8.68e3	70.94 70.94	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	8.82e3 8.82e3	70.45 70.45	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	9.64e3 9.64e3	67.73 67.73	AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	1.10e4 1.10e4	63.04 63.04	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.23e4 1.23e4	58.68 58.68	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	18 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	19 genes ENSG00000144034 TPRKB ENSMUSG00000054226 Tprkb ENSPTRG00000012066 TPRKB ENSGGOG00000009062 TPRKB ENSMMUG00000030634 TPRKB ENSMMUG00000030805 ENSRNOG00000015818 Tprkb ENSBTAG00000011176 TPRKB ENSSSCG00000008297 TPRKB ENSECAG00000007070 TPRKB ENSOCUG00000016251 TPRKB ENSCAFG00000008802 TPRKB ENSFCAG00000028878 TPRKB ENSCPOG00000025899 TPRKB ENSEEUG00000015404 TPRKB ENSOANG00000022718 TPRKB ENSGALG00000013018 TPRKB ENSACAG00000007787 TPRKB ENSXETG00000023300 tprkb	Compare expression	[+]
Bilateria	19 species Homo sapiens (human) Mus musculus (mouse) Caenorhabditis elegans (nematode) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	20 genes ENSG00000144034 TPRKB ENSMUSG00000054226 Tprkb WBGene00020994 W03F8.4 ENSPTRG00000012066 TPRKB ENSGGOG00000009062 TPRKB ENSMMUG00000030634 TPRKB ENSMMUG00000030805 ENSRNOG00000015818 Tprkb ENSBTAG00000011176 TPRKB ENSSSCG00000008297 TPRKB ENSECAG00000007070 TPRKB ENSOCUG00000016251 TPRKB ENSCAFG00000008802 TPRKB ENSFCAG00000028878 TPRKB ENSCPOG00000025899 TPRKB ENSEEUG00000015404 TPRKB ENSOANG00000022718 TPRKB ENSGALG00000013018 TPRKB ENSACAG00000007787 TPRKB ENSXETG00000023300 tprkb	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000014941.

Cross-references

Ensembl	ENSDARG00000014941 (tprkb)
ZFIN	ZDB-GENE-041114-68 (tprkb)
EMBL	CU855579
Uniprot/SPTREMBL	F1QZ15, F1QZ15_DANRE