D. rerio Gene: jagn1b - ENSDARG00000014995 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000014995
Namejagn1b
Descriptionjagunal homolog 1b [Source:ZFIN;Acc:ZDB-GENE-040801-103]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fb07b07, zgc:101045

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.57e3
  • 1.57e3
  • 6.31e3
  • 7.31e3
  • 7.84e3
94.76
  • 94.76
  • 78.87
  • 75.51
  • 73.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.29e3
  • 3.29e3
89.00
  • 89.00
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.40e3
  • 3.40e3
88.61
  • 88.61
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.77e3
  • 3.77e3
87.37
  • 87.37
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
4.03e3
  • 4.03e3
  • 5.29e3
  • 5.59e3
  • 5.70e3
  • 5.92e3
86.50
  • 86.50
  • 82.29
  • 81.28
  • 80.93
  • 80.19
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.11e3
  • 4.11e3
86.25
  • 86.25
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.15e3
  • 4.15e3
86.12
  • 86.12
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.18e3
  • 4.18e3
86.00
  • 86.00
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.36e3
  • 4.36e3
85.39
  • 85.39
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.48e3
  • 4.48e3
85.01
  • 85.01
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
4.64e3
  • 4.64e3
  • 4.70e3
84.46
  • 84.46
  • 84.28
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
4.83e3
  • 4.83e3
  • 5.32e3
  • 5.95e3
  • 6.74e3
  • 6.79e3
  • 6.80e3
  • 7.27e3
  • 7.29e3
  • 7.52e3
  • 8.91e3
83.83
  • 83.83
  • 82.20
  • 80.08
  • 77.44
  • 77.27
  • 77.22
  • 75.64
  • 75.60
  • 74.82
  • 70.15
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.02e3
  • 5.02e3
83.19
  • 83.19
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.03e3
  • 5.03e3
83.18
  • 83.18
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.05e3
  • 5.05e3
83.08
  • 83.08
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
5.12e3
  • 5.12e3
82.84
  • 82.84
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
5.20e3
  • 5.20e3
  • 6.20e3
  • 8.05e3
  • 8.68e3
  • 8.72e3
  • 9.83e3
82.57
  • 82.57
  • 79.24
  • 73.04
  • 70.92
  • 70.82
  • 67.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
5.23e3
  • 5.23e3
82.50
  • 82.50
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.23e3
  • 5.23e3
82.49
  • 82.49
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.28e3
  • 5.28e3
82.33
  • 82.33
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
5.35e3
  • 5.35e3
  • 8.17e3
  • 9.74e3
82.09
  • 82.09
  • 72.65
  • 67.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.64e3
  • 5.64e3
81.12
  • 81.12
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.98e3
  • 5.98e3
79.97
  • 79.97
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000106zygote stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000036Larval:Day 4
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
6.19e3
  • 6.19e3
  • 6.91e3
  • 7.51e3
  • 8.13e3
  • 8.40e3
  • 8.63e3
  • 8.71e3
  • 8.76e3
  • 8.81e3
  • 9.41e3
  • 1.01e4
  • 1.01e4
  • 1.02e4
  • 1.07e4
  • 1.38e4
  • 1.49e4
  • 1.50e4
79.29
  • 79.29
  • 76.86
  • 74.86
  • 72.79
  • 71.88
  • 71.11
  • 70.83
  • 70.68
  • 70.50
  • 68.51
  • 66.32
  • 66.06
  • 65.88
  • 64.03
  • 53.85
  • 50.20
  • 49.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.76e3
  • 6.76e3
77.38
  • 77.38
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.79e3
  • 6.79e3
77.27
  • 77.27
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.94e3
  • 6.94e3
76.77
  • 76.77
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
7.20e3
  • 7.20e3
75.89
  • 75.89
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
7.23e3
  • 7.23e3
  • 7.72e3
75.81
  • 75.81
  • 74.14
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
7.58e3
  • 7.58e3
  • 1.18e4
74.61
  • 74.61
  • 60.57
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
9.47e3
  • 9.47e3
68.28
  • 68.28
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
  • 1.50e4
57.14
  • 57.14
  • 49.94
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLCR956626
EnsemblENSDARG00000014995 (jagn1b)
Uniprot/SPTREMBLG1K2H4, G1K2H4_DANRE
Uniprot/SWISSPROTJGN1B_DANRE, Q1L864
ZFINZDB-GENE-040801-103 (jagn1b)

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