D. rerio Gene: calm3a - ENSDARG00000015050 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000015050
Namecalm3a
Descriptioncalmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
OrganismDanio rerio (zebrafish)
Synonym(s)calm1b, calm2, calm2g, calmx5, cam alpha 2, cam3 gamma, camgamma, cb169, q4v949, wu:fi05b08, zgc:64036, zgc:86728
Orthologs(s)55 orthologs
Paralog(s)49 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
52.8
  • 52.8
  • 2.08e3
99.83
  • 99.83
  • 93.05
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
148
  • 148
  • 226
  • 226
  • 252
  • 255
99.51
  • 99.51
  • 99.25
  • 99.25
  • 99.16
  • 99.15
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
148
  • 148
  • 6.12e3
  • 1.15e4
  • 1.20e4
99.51
  • 99.51
  • 79.52
  • 61.34
  • 59.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
171
  • 171
  • 230
99.43
  • 99.43
  • 99.23
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
191
  • 191
99.36
  • 99.36
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
194
  • 194
99.35
  • 99.35
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
201
  • 201
99.33
  • 99.33
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
213
  • 213
  • 567
99.29
  • 99.29
  • 98.11
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
247
  • 247
  • 332
99.18
  • 99.18
  • 98.89
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
285
  • 285
99.05
  • 99.05
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
355
  • 355
  • 394
  • 9.77e3
98.82
  • 98.82
  • 98.68
  • 67.29
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
477
  • 477
98.41
  • 98.41
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
536
  • 536
98.21
  • 98.21
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
577
  • 577
98.07
  • 98.07
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
691
  • 691
97.69
  • 97.69
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
711
  • 711
97.62
  • 97.62
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
744
  • 744
  • 2.18e3
97.51
  • 97.51
  • 92.69
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
826
  • 826
97.24
  • 97.24
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
856
  • 856
97.14
  • 97.14
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
899
  • 899
96.99
  • 96.99
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
903
  • 903
96.98
  • 96.98
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.18e3
  • 1.18e3
96.07
  • 96.07
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.20e3
  • 1.20e3
95.99
  • 95.99
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.53e3
  • 1.53e3
94.88
  • 94.88
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.04e3
  • 2.04e3
93.16
  • 93.16
AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
2.10e3
  • 2.10e3
92.96
  • 92.96
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
3.94e3
  • 3.94e3
  • 8.15e3
  • 8.71e3
  • 1.26e4
86.82
  • 86.82
  • 72.72
  • 70.82
  • 57.84
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000049segmentation
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
6.45e3
  • 6.45e3
  • 6.77e3
  • 7.00e3
  • 7.65e3
  • 1.16e4
  • 1.40e4
  • 1.43e4
  • 1.44e4
78.40
  • 78.40
  • 77.33
  • 76.57
  • 74.37
  • 61.10
  • 53.08
  • 51.99
  • 51.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000104life cycle
6.89e3
  • 6.89e3
  • 8.54e3
  • 8.79e3
  • 8.96e3
  • 9.13e3
  • 9.13e3
  • 1.36e4
76.92
  • 76.92
  • 71.41
  • 70.57
  • 69.98
  • 69.43
  • 69.43
  • 54.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0008897fin
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
7.67e3
  • 7.67e3
  • 7.90e3
74.33
  • 74.33
  • 73.54
AEIR
  • AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
9.34e3
  • 9.34e3
  • 9.34e3
68.74
  • 68.74
  • 68.74
AEIR
  • AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
9.60e3
  • 9.60e3
  • 9.96e3
  • 1.03e4
  • 1.07e4
  • 1.28e4
  • 1.34e4
  • 1.41e4
  • 1.41e4
67.85
  • 67.85
  • 66.65
  • 65.37
  • 64.27
  • 57.13
  • 55.24
  • 52.92
  • 52.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0008904neuromast
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
9.60e3
  • 9.60e3
  • 1.12e4
67.85
  • 67.85
  • 62.49
AEIR
  • AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
9.71e3
  • 9.71e3
  • 1.02e4
  • 1.30e4
  • 1.35e4
  • 1.42e4
67.48
  • 67.48
  • 65.89
  • 56.49
  • 54.96
  • 52.35
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.02e4
  • 1.02e4
  • 1.09e4
65.89
  • 65.89
  • 63.61
AEIR
  • AEIR
  • AEIR
UBERON:0007269pectoral appendage musculature
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.03e4
  • 1.03e4
  • 1.03e4
65.61
  • 65.61
  • 65.61
AEIR
  • AEIR
  • AEIR
UBERON:0001945superior colliculus
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.08e4
  • 1.08e4
  • 1.08e4
63.87
  • 63.87
  • 63.87
AEIR
  • AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.10e4
  • 1.10e4
  • 1.10e4
63.14
  • 63.14
  • 63.14
AEIR
  • AEIR
  • AEIR
UBERON:0003075neural plate
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
1.26e4
  • 1.26e4
  • 1.26e4
  • 1.28e4
57.87
  • 57.87
  • 57.87
  • 57.12
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001846internal ear
  • UBERON:0000068embryo stage
1.27e4
  • 1.27e4
57.33
  • 57.33
AEIR
  • AEIR
UBERON:0005426lens vesicle
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
1.32e4
  • 1.32e4
  • 1.34e4
  • 1.40e4
55.86
  • 55.86
  • 54.97
  • 53.10
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003069otic placode
  • ZFS:0000026Segmentation:14-19 somites
1.42e4
  • 1.42e4
52.60
  • 52.60
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species44 genesCompare expression
Bilateria25 species55 genesCompare expression

Orthology information comes from OMA : ENSDARG00000015050.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi5 genesCompare expression
Eukaryota49 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000015050.

Cross-references

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