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D. rerio Gene: c4 - ENSDARG00000015065 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000015065
Namec4
Descriptioncomplement component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5697]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fi14a03
Orthologs(s)21 orthologs
Paralog(s)8 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
952
  • 952
96.82
  • 96.82
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
986
  • 986
  • 1.64e4
96.70
  • 96.70
  • 45.15
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.01e3
  • 1.01e3
96.62
  • 96.62
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.39e3
  • 1.39e3
95.34
  • 95.34
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.71e3
  • 1.71e3
94.28
  • 94.28
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.76e3
  • 1.76e3
94.11
  • 94.11
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.88e3
  • 1.88e3
93.71
  • 93.71
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.36e3
  • 2.36e3
92.10
  • 92.10
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
3.21e3
  • 3.21e3
89.24
  • 89.24
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.62e3
  • 3.62e3
87.88
  • 87.88
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.25e3
  • 4.25e3
85.76
  • 85.76
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.30e3
  • 5.30e3
82.26
  • 82.26
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.64e3
  • 5.64e3
81.13
  • 81.13
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
6.41e3
  • 6.41e3
78.52
  • 78.52
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.85e3
  • 6.85e3
77.06
  • 77.06
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
8.21e3
  • 8.21e3
  • 1.61e4
72.50
  • 72.50
  • 46.06
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
  • 1.59e4
  • 1.65e4
57.32
  • 57.32
  • 46.92
  • 44.78
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.68
  • 56.68
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.43
  • 49.43
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
1.53e4
  • 1.53e4
  • 1.64e4
  • 1.83e4
48.64
  • 48.64
  • 45.03
  • 38.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
1.55e4
  • 1.55e4
  • 1.67e4
  • 1.68e4
  • 1.69e4
47.96
  • 47.96
  • 43.91
  • 43.69
  • 43.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
1.58e4
  • 1.58e4
  • 1.62e4
  • 1.78e4
  • 1.81e4
  • 1.92e4
  • 2.15e4
  • 2.24e4
47.13
  • 47.13
  • 45.80
  • 40.24
  • 39.27
  • 35.62
  • 27.96
  • 25.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.65
  • 45.65
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.67e4
  • 1.67e4
  • 1.70e4
  • 1.89e4
44.19
  • 44.19
  • 43.12
  • 36.66
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.71e4
  • 1.71e4
42.86
  • 42.86
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
1.71e4
  • 1.71e4
  • 1.72e4
  • 1.78e4
  • 1.78e4
  • 1.79e4
  • 1.80e4
  • 1.83e4
42.74
  • 42.74
  • 42.32
  • 40.55
  • 40.38
  • 40.18
  • 39.85
  • 38.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)

Paralogy information comes from OMA : ENSDARG00000015065.

Cross-references

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