D. rerio Gene: atp6v0a1b - ENSDARG00000015174 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000015174
Nameatp6v0a1b
DescriptionATPase, H+ transporting, lysosomal V0 subunit a1b [Source:ZFIN;Acc:ZDB-GENE-050522-215]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fj37e01, zgc:112214
Orthologs(s)26 orthologs
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
517
  • 517
98.27
  • 98.27
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
992
  • 992
96.68
  • 96.68
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
2.21e3
  • 2.21e3
  • 4.54e3
  • 1.00e4
  • 1.28e4
  • 1.28e4
92.62
  • 92.62
  • 84.81
  • 66.49
  • 57.24
  • 57.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.40e3
  • 2.40e3
  • 3.94e3
91.96
  • 91.96
  • 86.82
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
3.85e3
  • 3.85e3
  • 9.82e3
87.12
  • 87.12
  • 67.12
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.10
  • 59.10
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.31e4
  • 1.31e4
  • 1.66e4
55.98
  • 55.98
  • 44.57
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
52.98
  • 52.98
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.42e4
  • 1.42e4
52.41
  • 52.41
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.48e4
  • 1.48e4
  • 1.50e4
50.28
  • 50.28
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.94
  • 49.94
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.63
  • 46.63
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.69e4
  • 1.69e4
43.53
  • 43.53
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.66
  • 36.66
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.00e4
  • 2.00e4
33.02
  • 33.02
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.05e4
  • 2.05e4
31.32
  • 31.32
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.07e4
  • 2.07e4
30.66
  • 30.66
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.12e4
  • 2.12e4
29.13
  • 29.13
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.22e4
  • 2.22e4
25.61
  • 25.61
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species18 genesCompare expression
Bilateria25 species26 genesCompare expression

Orthology information comes from OMA : ENSDARG00000015174.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression
Opisthokonta6 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000015174.

Cross-references

EnsemblENSDARG00000015174 (atp6v0a1b)
ZFINZDB-GENE-050522-215 (atp6v0a1b)
EMBLBX294185
Uniprot/SPTREMBLF1QE30, F1QE30_DANRE

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