D. rerio Gene: nsrp1 - ENSDARG00000015221 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000015221
Namensrp1
Descriptionnuclear speckle splicing regulatory protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2646]
OrganismDanio rerio (zebrafish)
Synonym(s)ccdc55, fc14d05, wu:fc14d05, zgc:152777
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
3.04e3
  • 3.04e3
  • 3.37e3
  • 7.40e3
  • 8.34e3
  • 8.42e3
89.82
  • 89.82
  • 88.73
  • 75.24
  • 72.08
  • 71.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.20e3
  • 3.20e3
89.28
  • 89.28
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
3.41e3
  • 3.41e3
  • 4.29e3
  • 4.85e3
  • 4.85e3
  • 6.58e3
  • 6.92e3
88.57
  • 88.57
  • 85.63
  • 83.78
  • 83.76
  • 77.98
  • 76.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.99e3
  • 3.99e3
86.65
  • 86.65
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
4.52e3
  • 4.52e3
  • 5.31e3
  • 6.13e3
  • 7.12e3
  • 8.04e3
  • 8.12e3
  • 8.61e3
  • 8.78e3
  • 8.78e3
  • 1.05e4
84.85
  • 84.85
  • 82.22
  • 79.49
  • 76.16
  • 73.09
  • 72.82
  • 71.18
  • 70.59
  • 70.59
  • 64.72
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.68e3
  • 4.68e3
84.32
  • 84.32
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
4.75e3
  • 4.75e3
84.11
  • 84.11
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.81e3
  • 4.81e3
83.88
  • 83.88
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
4.84e3
  • 4.84e3
  • 7.78e3
83.80
  • 83.80
  • 73.95
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
5.00e3
  • 5.00e3
  • 1.05e4
83.28
  • 83.28
  • 64.91
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.30e3
  • 5.30e3
82.25
  • 82.25
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
5.57e3
  • 5.57e3
  • 5.63e3
  • 7.16e3
  • 8.91e3
81.35
  • 81.35
  • 81.16
  • 76.02
  • 70.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.64e3
  • 5.64e3
81.10
  • 81.10
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
6.09e3
  • 6.09e3
  • 1.08e4
  • 1.49e4
79.60
  • 79.60
  • 63.98
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.15e3
  • 6.15e3
79.42
  • 79.42
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
6.40e3
  • 6.40e3
78.56
  • 78.56
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.42e3
  • 6.42e3
78.51
  • 78.51
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.87e3
  • 6.87e3
76.99
  • 76.99
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
7.01e3
  • 7.01e3
76.54
  • 76.54
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.11e3
  • 7.11e3
76.20
  • 76.20
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.15e3
  • 7.15e3
76.05
  • 76.05
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.16e3
  • 7.16e3
76.03
  • 76.03
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000106zygote stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
7.21e3
  • 7.21e3
  • 7.30e3
  • 7.31e3
  • 7.31e3
  • 8.20e3
  • 9.25e3
  • 1.03e4
  • 1.10e4
  • 1.12e4
  • 1.18e4
  • 1.20e4
  • 1.22e4
  • 1.24e4
  • 1.26e4
  • 1.46e4
  • 1.49e4
  • 1.50e4
75.85
  • 75.85
  • 75.57
  • 75.52
  • 75.52
  • 72.54
  • 69.02
  • 65.49
  • 63.25
  • 62.63
  • 60.54
  • 59.86
  • 59.00
  • 58.53
  • 57.89
  • 51.01
  • 50.25
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
7.59e3
  • 7.59e3
74.58
  • 74.58
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.86e3
  • 7.86e3
73.67
  • 73.67
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.87e3
  • 7.87e3
73.67
  • 73.67
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.19e3
  • 8.19e3
72.59
  • 72.59
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
8.88e3
  • 8.88e3
70.28
  • 70.28
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.90e3
  • 8.90e3
70.20
  • 70.20
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
9.94e3
  • 9.94e3
  • 1.04e4
66.73
  • 66.73
  • 65.24
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
9.97e3
  • 9.97e3
  • 1.12e4
  • 1.31e4
66.60
  • 66.60
  • 62.57
  • 56.20
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.66
  • 63.66
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.31
  • 59.31
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.28e4
  • 1.28e4
57.14
  • 57.14
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000015221 (nsrp1)
ZFINZDB-GENE-030131-2646 (nsrp1)
EMBLCR847523
Uniprot/SPTREMBLF1R8E3, F1R8E3_DANRE

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