D. rerio Gene: foxf1 - ENSDARG00000015399 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000015399
Namefoxf1
Descriptionforkhead box F1 [Source:ZFIN;Acc:ZDB-GENE-050419-153]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-199i24.2, zgc:158301

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.68e3
  • 1.68e3
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
8.17e3
  • 8.17e3
  • 1.24e4
  • 1.24e4
  • 1.41e4
  • 1.55e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.73e3
  • 8.73e3
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
AEIR
  • AEIR
UBERON:0006860swim bladder
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000034Hatching:Pec-fin
1.23e4
  • 1.23e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000029Pharyngula:Prim-5
1.28e4
  • 1.28e4
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.30e4
  • 1.30e4
AEIR
  • AEIR
UBERON:0006859swim bladder bud
  • ZFS:0000031Pharyngula:Prim-25
1.48e4
  • 1.48e4
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.92e4
  • 1.92e4
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.36e4
  • 2.36e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBC129194, BX571798
EnsemblENSDARG00000015399 (foxf1)
Uniprot/SWISSPROTA1L1S5, FOXF1_DANRE
ZFINZDB-GENE-050419-153 (foxf1)

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