D. rerio Gene: arl3l2 - ENSDARG00000015404 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000015404
Namearl3l2
DescriptionADP-ribosylation factor-like 3, like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1678]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:73116
Orthologs(s)3 orthologs
Paralog(s)31 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
1.10e3
  • 1.10e3
  • 6.59e3
  • 1.35e4
  • 1.39e4
  • 1.41e4
  • 1.42e4
96.33
  • 96.33
  • 77.92
  • 54.95
  • 53.31
  • 52.73
  • 52.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000029Pharyngula:Prim-5
1.80e3
  • 1.80e3
  • 2.88e3
  • 1.12e4
93.99
  • 93.99
  • 90.35
  • 62.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
4.99e3
  • 4.99e3
  • 8.24e3
  • 1.36e4
  • 1.37e4
  • 1.37e4
  • 1.43e4
  • 1.45e4
  • 1.51e4
  • 1.54e4
  • 1.85e4
83.30
  • 83.30
  • 72.41
  • 54.56
  • 54.22
  • 54.01
  • 52.21
  • 51.56
  • 49.39
  • 48.28
  • 37.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
7.32e3
  • 7.32e3
  • 1.17e4
  • 1.23e4
  • 1.23e4
  • 1.29e4
  • 1.57e4
75.48
  • 75.48
  • 60.69
  • 58.98
  • 58.79
  • 56.87
  • 47.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
7.64e3
  • 7.64e3
  • 1.12e4
  • 1.46e4
74.43
  • 74.43
  • 62.64
  • 51.19
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000036Larval:Day 4
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000066fully formed stage
7.72e3
  • 7.72e3
  • 9.34e3
  • 9.43e3
  • 1.02e4
  • 1.03e4
  • 1.04e4
  • 1.05e4
  • 1.06e4
  • 1.06e4
  • 1.09e4
  • 1.13e4
  • 1.15e4
  • 1.17e4
  • 1.19e4
  • 1.19e4
  • 1.20e4
  • 1.50e4
74.16
  • 74.16
  • 68.74
  • 68.41
  • 65.99
  • 65.61
  • 65.06
  • 64.69
  • 64.53
  • 64.45
  • 63.59
  • 62.01
  • 61.48
  • 60.84
  • 60.12
  • 60.00
  • 59.91
  • 49.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
1.10e4
  • 1.10e4
  • 1.10e4
  • 1.28e4
  • 1.62e4
63.21
  • 63.21
  • 63.05
  • 57.16
  • 45.79
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
  • 1.69e4
62.92
  • 62.92
  • 43.53
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.61
  • 60.61
AEIR
  • AEIR
UBERON:0001905pineal body
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.18e4
  • 1.18e4
  • 1.28e4
  • 1.42e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
60.50
  • 60.50
  • 57.14
  • 52.35
  • 49.98
  • 49.98
  • 49.98
  • 49.98
  • 49.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.19e4
  • 1.19e4
60.17
  • 60.17
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
  • 1.46e4
59.12
  • 59.12
  • 51.26
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.26
  • 58.26
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.26e4
  • 1.26e4
57.74
  • 57.74
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.27e4
  • 1.27e4
57.55
  • 57.55
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.69
  • 56.69
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.09
  • 56.09
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.33e4
  • 1.33e4
55.42
  • 55.42
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.59
  • 54.59
AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.36e4
  • 1.36e4
  • 1.43e4
54.32
  • 54.32
  • 52.24
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.30
  • 53.30
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.68
  • 52.68
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.66
  • 51.66
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.39
  • 49.39
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.64
  • 45.64
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.66e4
  • 1.66e4
44.34
  • 44.34
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.07e4
  • 2.07e4
30.70
  • 30.70
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.20e4
  • 2.20e4
26.46
  • 26.46
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.33e4
  • 2.33e4
22.09
  • 22.09
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Orthology information comes from OMA : ENSDARG00000015404.

Paralogs (same species)

Cross-references

EnsemblENSDARG00000015404 (arl3l2)
ZFINZDB-GENE-040426-1678 (arl3l2)
EMBLBC059480, CU462913
Uniprot/SPTREMBLQ6PC43, Q6PC43_DANRE

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