D. rerio Gene: racgap1 - ENSDARG00000015460 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000015460
Nameracgap1
DescriptionRac GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1917]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fb92c08, zgc:77839

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
408
  • 408
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.71e3
  • 1.71e3
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
1.85e3
  • 1.85e3
  • 2.39e3
  • 4.29e3
  • 4.79e3
  • 5.28e3
  • 5.40e3
  • 7.93e3
  • 9.34e3
  • 9.97e3
  • 1.18e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.60e3
  • 2.60e3
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000106zygote stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
2.74e3
  • 2.74e3
  • 3.01e3
  • 3.71e3
  • 4.43e3
  • 5.52e3
  • 5.84e3
  • 5.93e3
  • 7.23e3
  • 8.25e3
  • 8.51e3
  • 1.05e4
  • 1.09e4
  • 1.11e4
  • 1.11e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
2.76e3
  • 2.76e3
  • 3.72e3
  • 4.77e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000098proliferative region
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000031Pharyngula:Prim-25
2.96e3
  • 2.96e3
  • 3.29e3
  • 3.29e3
  • 3.29e3
  • 3.70e3
  • 4.93e3
  • 4.93e3
  • 4.93e3
  • 5.92e3
  • 8.22e3
  • 8.46e3
  • 8.46e3
  • 8.46e3
  • 8.46e3
  • 8.46e3
  • 8.46e3
  • 8.88e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
3.07e3
  • 3.07e3
  • 3.87e3
  • 4.71e3
  • 4.91e3
  • 5.11e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.77e3
  • 3.77e3
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.97e3
  • 3.97e3
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
5.17e3
  • 5.17e3
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.72e3
  • 6.72e3
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
6.89e3
  • 6.89e3
  • 8.00e3
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.03e3
  • 7.03e3
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.10e3
  • 7.10e3
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.32e3
  • 7.32e3
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
8.35e3
  • 8.35e3
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
8.45e3
  • 8.45e3
  • 1.33e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.80e3
  • 8.80e3
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
9.05e3
  • 9.05e3
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
9.67e3
  • 9.67e3
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
  • 2.06e4
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
  • 1.32e4
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.31e4
  • 1.31e4
  • 1.34e4
  • 1.46e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
AEIR
  • AEIR
UBERON:0004749blastodisc
  • UBERON:0000106zygote stage
1.48e4
  • 1.48e4
AEIR
  • AEIR
UBERON:0004750blastoderm
  • ZFS:0000019Gastrula:Shield
1.48e4
  • 1.48e4
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC063983, CR354542
EnsemblENSDARG00000015460 (racgap1)
Uniprot/SPTREMBLE9QHH8, E9QHH8_DANRE, Q6P3H8, Q6P3H8_DANRE
ZFINZDB-GENE-030131-1917 (racgap1)

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