D. rerio Gene: psen2 - ENSDARG00000015540 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000015540
Namepsen2
Descriptionpresenilin 2 [Source:ZFIN;Acc:ZDB-GENE-000330-9]
OrganismDanio rerio (zebrafish)
Synonym(s)pre2, q9i991, zf-ps2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.08e3
  • 3.08e3
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.36e3
  • 3.36e3
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000027Segmentation:20-25 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000106zygote stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
5.38e3
  • 5.38e3
  • 5.64e3
  • 7.40e3
  • 7.40e3
  • 7.84e3
  • 7.89e3
  • 8.07e3
  • 8.07e3
  • 8.07e3
  • 8.07e3
  • 8.07e3
  • 8.07e3
  • 8.07e3
  • 8.07e3
  • 8.07e3
  • 8.07e3
  • 8.07e3
  • 8.07e3
  • 8.63e3
  • 8.63e3
  • 8.71e3
  • 9.87e3
  • 9.87e3
  • 1.15e4
  • 1.16e4
  • 1.17e4
  • 1.20e4
  • 1.20e4
  • 1.21e4
  • 1.28e4
  • 1.30e4
  • 1.31e4
  • 1.35e4
  • 1.35e4
  • 1.35e4
  • 1.37e4
  • 1.39e4
  • 1.45e4
  • 1.48e4
  • 1.49e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.41e3
  • 5.41e3
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
5.53e3
  • 5.53e3
  • 6.14e3
  • 6.18e3
  • 6.85e3
  • 7.47e3
  • 9.23e3
  • 9.70e3
  • 9.72e3
  • 9.95e3
  • 1.20e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.64e3
  • 5.64e3
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.71e3
  • 5.71e3
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.07e3
  • 6.07e3
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.63e3
  • 6.63e3
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.65e3
  • 6.65e3
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.71e3
  • 6.71e3
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
7.32e3
  • 7.32e3
  • 1.04e4
  • 1.06e4
  • 1.12e4
  • 1.13e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.32e3
  • 7.32e3
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
7.33e3
  • 7.33e3
  • 8.46e3
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.45e3
  • 7.45e3
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.18e3
  • 8.18e3
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
8.61e3
  • 8.61e3
  • 8.80e3
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
8.90e3
  • 8.90e3
  • 1.06e4
  • 1.07e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.09e3
  • 9.09e3
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
9.16e3
  • 9.16e3
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
9.79e3
  • 9.79e3
  • 1.14e4
  • 1.14e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.89e3
  • 9.89e3
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.97e3
  • 9.97e3
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
  • 1.25e4
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.02e4
  • 1.02e4
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.03e4
  • 1.03e4
  • 1.26e4
  • 1.26e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.18e4
  • 1.18e4
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000035Larval:Protruding-mouth
1.23e4
  • 1.23e4
  • 1.33e4
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000029Pharyngula:Prim-5
1.27e4
  • 1.27e4
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.38e4
  • 1.38e4
AEIR
  • AEIR
CL:0000148melanocyte
  • ZFS:0000029Pharyngula:Prim-5
1.48e4
  • 1.48e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLAF178539, AJ271795
EnsemblENSDARG00000015540 (psen2)
Uniprot/SWISSPROTPSN2_DANRE, Q90ZE4
ZFINZDB-GENE-000330-9 (psen2)

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