D. rerio Gene: psmd10 - ENSDARG00000015628 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000015628
Namepsmd10
Descriptionproteasome 26S subunit, non-ATPase 10 [Source:ZFIN;Acc:ZDB-GENE-050112-1]
OrganismDanio rerio (zebrafish)
Synonym(s)gank, gankyrin, psmd10, zgc:109707
Orthologs(s)20 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.45e3
  • 1.45e3
95.14
  • 95.14
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.08e3
  • 3.08e3
89.68
  • 89.68
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.23e3
  • 3.23e3
89.17
  • 89.17
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.26e3
  • 3.26e3
89.09
  • 89.09
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
3.66e3
  • 3.66e3
  • 3.77e3
  • 5.59e3
  • 7.29e3
  • 7.74e3
87.74
  • 87.74
  • 87.37
  • 81.27
  • 75.60
  • 74.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.74e3
  • 3.74e3
87.48
  • 87.48
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.88e3
  • 3.88e3
87.02
  • 87.02
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.93e3
  • 3.93e3
86.85
  • 86.85
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.42e3
  • 4.42e3
85.21
  • 85.21
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.46e3
  • 4.46e3
85.07
  • 85.07
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.74e3
  • 4.74e3
84.14
  • 84.14
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
4.84e3
  • 4.84e3
  • 5.19e3
  • 5.54e3
  • 7.10e3
  • 7.46e3
  • 7.56e3
  • 7.88e3
  • 8.33e3
  • 1.00e4
  • 1.03e4
83.80
  • 83.80
  • 82.64
  • 81.46
  • 76.21
  • 75.04
  • 74.68
  • 73.62
  • 72.11
  • 66.50
  • 65.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.98e3
  • 4.98e3
83.33
  • 83.33
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000028Segmentation:26+ somites
  • UBERON:0000106zygote stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000036Larval:Day 4
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000037Larval:Day 5
4.98e3
  • 4.98e3
  • 6.26e3
  • 6.54e3
  • 6.63e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.92e3
  • 6.96e3
  • 6.97e3
  • 7.03e3
  • 7.47e3
  • 7.47e3
  • 7.74e3
  • 7.74e3
  • 7.91e3
  • 8.18e3
  • 8.96e3
  • 8.96e3
  • 9.27e3
  • 9.39e3
  • 9.43e3
  • 9.51e3
  • 1.03e4
  • 1.03e4
  • 1.20e4
83.33
  • 83.33
  • 79.03
  • 78.12
  • 77.79
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.82
  • 76.71
  • 76.66
  • 76.46
  • 74.99
  • 74.99
  • 74.09
  • 74.08
  • 73.52
  • 72.61
  • 69.99
  • 69.99
  • 68.97
  • 68.55
  • 68.41
  • 68.15
  • 65.58
  • 65.48
  • 59.77
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.09e3
  • 5.09e3
82.97
  • 82.97
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
5.28e3
  • 5.28e3
  • 9.63e3
82.32
  • 82.32
  • 67.75
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
5.36e3
  • 5.36e3
82.05
  • 82.05
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.47e3
  • 5.47e3
81.68
  • 81.68
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.78e3
  • 5.78e3
80.66
  • 80.66
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
6.22e3
  • 6.22e3
  • 7.60e3
79.17
  • 79.17
  • 74.56
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.30e3
  • 6.30e3
78.92
  • 78.92
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
6.39e3
  • 6.39e3
  • 9.59e3
78.62
  • 78.62
  • 67.90
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
6.55e3
  • 6.55e3
  • 7.03e3
  • 7.44e3
  • 8.29e3
  • 9.41e3
  • 1.05e4
78.07
  • 78.07
  • 76.46
  • 75.10
  • 72.23
  • 68.49
  • 64.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.74e3
  • 6.74e3
77.43
  • 77.43
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
6.78e3
  • 6.78e3
77.28
  • 77.28
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.83e3
  • 6.83e3
77.13
  • 77.13
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.96e3
  • 6.96e3
76.70
  • 76.70
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.98e3
  • 6.98e3
  • 8.18e3
76.62
  • 76.62
  • 72.60
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
7.06e3
  • 7.06e3
  • 7.58e3
  • 9.25e3
  • 9.49e3
76.36
  • 76.36
  • 74.61
  • 69.02
  • 68.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.17e3
  • 7.17e3
76.00
  • 76.00
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.27e3
  • 7.27e3
75.66
  • 75.66
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
7.76e3
  • 7.76e3
74.02
  • 74.02
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
7.90e3
  • 7.90e3
  • 8.38e3
  • 8.74e3
73.54
  • 73.54
  • 71.95
  • 70.73
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
7.93e3
  • 7.93e3
73.44
  • 73.44
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species19 genesCompare expression
Bilateria18 species20 genesCompare expression

Orthology information comes from OMA : ENSDARG00000015628.

Cross-references

EnsemblENSDARG00000015628 (psmd10)
ZFINZDB-GENE-050112-1 (psmd10)
EMBLAY398401, BX088535, DQ388034
Uniprot/SPTREMBLQ6TGV5, Q6TGV5_DANRE

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