D. rerio Gene: ca15a - ENSDARG00000015654 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000015654
Nameca15a
Descriptioncarbonic anhydrase XVa [Source:ZFIN;Acc:ZDB-GENE-070424-7]
OrganismDanio rerio (zebrafish)
Synonym(s)ca4-like, ca4c, zca15a, zgc:158584
Orthologs(s)4 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
444
  • 444
98.52
  • 98.52
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.47e3
  • 3.47e3
  • 1.90e4
88.37
  • 88.37
  • 36.24
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
4.12e3
  • 4.12e3
  • 5.39e3
86.21
  • 86.21
  • 81.97
AEIR
  • AEIR
  • AEIR
UBERON:0011150pharyngeal arch derived gill
  • ZFS:0000037Larval:Day 5
  • ZFS:0000039Larval:Days 7-13
4.98e3
  • 4.98e3
  • 1.49e4
83.34
  • 83.34
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
6.54e3
  • 6.54e3
  • 7.01e3
  • 7.58e3
  • 8.02e3
  • 8.32e3
78.10
  • 78.10
  • 76.52
  • 74.61
  • 73.14
  • 72.15
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000035Larval:Protruding-mouth
7.47e3
  • 7.47e3
  • 1.19e4
  • 1.49e4
75.00
  • 75.00
  • 60.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000036Larval:Day 4
9.96e3
  • 9.96e3
66.67
  • 66.67
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
  • 2.34e4
65.10
  • 65.10
  • 21.74
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.71
  • 62.71
AEIR
  • AEIR
ZFA:0005327vH ionocyte (Danio)
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
CL:0005006ionocyte
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000039Larval:Days 7-13
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:2000084yolk
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
47.96
  • 47.96
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.87e4
  • 1.87e4
37.28
  • 37.28
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.99e4
  • 1.99e4
33.46
  • 33.46
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.26e4
  • 2.26e4
24.31
  • 24.31
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Otophysi3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000015654.

Cross-references

EnsemblENSDARG00000015654 (ca15a)
ZFINZDB-GENE-070424-7 (ca15a)
EMBLCU571308
Uniprot/SPTREMBLF1Q816, F1Q816_DANRE

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