D. rerio Gene: npas3b - ENSDARG00000015876 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000015876
Namenpas3b
Descriptionneuronal PAS domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-060503-934]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkeyp-13e2.1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
1.11e4
  • 1.11e4
  • 1.23e4
  • 1.41e4
  • 1.75e4
  • 1.77e4
62.64435
  • 62.64435
  • 58.30531
  • 52.48171
  • 40.78759
  • 40.11874
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
55.69732
  • 55.69732
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
  • 2.31e4
51.80817
  • 51.80817
  • 21.93737
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.72e4
  • 1.72e4
41.77882
  • 41.77882
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.31e4
  • 2.31e4
21.95427
  • 21.95427
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBX296539
EnsemblENSDARG00000015876 (npas3b)
Uniprot/SPTREMBLQ1LXP7, Q1LXP7_DANRE
ZFINZDB-GENE-060503-934 (npas3b)

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