D. rerio Gene: slc44a1a - ENSDARG00000015946 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000015946
Nameslc44a1a
Descriptionsolute carrier family 44 (choline transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050417-204]
OrganismDanio rerio (zebrafish)
Synonym(s)cdw92, slc44a1, zgc:112201

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.48e3
  • 1.48e3
95.01124
  • 95.01124
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
4.54e3
  • 4.54e3
  • 5.19e3
  • 5.45e3
  • 9.64e3
  • 1.32e4
84.66192
  • 84.66192
  • 82.44808
  • 81.58140
  • 67.42720
  • 55.30884
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.55e3
  • 4.55e3
84.61122
  • 84.61122
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.60e3
  • 4.60e3
84.45940
  • 84.45940
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.01e3
  • 6.01e3
79.67449
  • 79.67449
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.24e3
  • 7.24e3
75.53614
  • 75.53614
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
7.87e3
  • 7.87e3
73.38989
  • 73.38989
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.06e3
  • 8.06e3
72.74771
  • 72.74771
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.68e3
  • 8.68e3
70.68257
  • 70.68257
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.74e3
  • 9.74e3
67.06944
  • 67.06944
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.49778
  • 65.49778
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
64.93911
  • 64.93911
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.10812
  • 64.10812
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.07e4
  • 1.07e4
63.90617
  • 63.90617
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.14197
  • 63.14197
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.27e4
  • 1.27e4
  • 1.54e4
56.91278
  • 56.91278
  • 47.84724
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.05227
  • 45.05227
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBX004781
EnsemblENSDARG00000015946 (slc44a1a)
Uniprot/SPTREMBLB8A445, B8A445_DANRE, F1Q9M4, F1Q9M4_DANRE
ZFINZDB-GENE-050417-204 (slc44a1a)

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