D. rerio Gene: zdhhc16b - ENSDARG00000015989 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000015989
Namezdhhc16b
Descriptionzinc finger, DHHC-type containing 16b [Source:ZFIN;Acc:ZDB-GENE-040426-1301]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:63934
Orthologs(s)6 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
5.37e3
  • 5.37e3
  • 7.77e3
  • 9.82e3
  • 9.87e3
82.01
  • 82.01
  • 73.99
  • 67.11
  • 66.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
5.44e3
  • 5.44e3
  • 5.73e3
  • 1.02e4
  • 1.23e4
  • 1.23e4
81.78
  • 81.78
  • 80.82
  • 65.71
  • 58.84
  • 58.77
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
6.00e3
  • 6.00e3
  • 9.26e3
  • 9.62e3
  • 1.11e4
  • 1.15e4
  • 1.15e4
79.90
  • 79.90
  • 68.99
  • 67.78
  • 62.86
  • 61.46
  • 61.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.05e3
  • 6.05e3
79.76
  • 79.76
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.78e3
  • 6.78e3
77.29
  • 77.29
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.78e3
  • 6.78e3
77.29
  • 77.29
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.84e3
  • 8.84e3
70.42
  • 70.42
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
9.07e3
  • 9.07e3
69.62
  • 69.62
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
9.09e3
  • 9.09e3
  • 9.42e3
  • 1.03e4
  • 1.16e4
  • 1.16e4
  • 1.16e4
  • 1.17e4
  • 1.20e4
  • 1.31e4
  • 1.37e4
69.57
  • 69.57
  • 68.45
  • 65.42
  • 61.28
  • 61.09
  • 60.99
  • 60.88
  • 59.74
  • 56.14
  • 54.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.27e3
  • 9.27e3
68.96
  • 68.96
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
9.34e3
  • 9.34e3
  • 1.01e4
68.73
  • 68.73
  • 66.23
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
9.58e3
  • 9.58e3
67.94
  • 67.94
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
9.63e3
  • 9.63e3
67.75
  • 67.75
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.81e3
  • 9.81e3
67.16
  • 67.16
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.67
  • 65.67
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.07e4
  • 1.07e4
  • 1.22e4
  • 1.42e4
64.01
  • 64.01
  • 59.29
  • 52.30
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.87
  • 63.87
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.75
  • 63.75
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.49
  • 63.49
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.32
  • 63.32
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.28
  • 63.28
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.90
  • 62.90
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.11e4
  • 1.11e4
  • 1.15e4
62.74
  • 62.74
  • 61.63
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.45
  • 62.45
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
  • 1.15e4
61.66
  • 61.66
  • 61.41
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000106zygote stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
  • 1.15e4
  • 1.15e4
  • 1.16e4
  • 1.17e4
  • 1.18e4
  • 1.19e4
  • 1.19e4
  • 1.21e4
  • 1.22e4
  • 1.22e4
  • 1.23e4
  • 1.25e4
  • 1.26e4
  • 1.48e4
  • 1.50e4
61.62
  • 61.62
  • 61.45
  • 61.39
  • 61.21
  • 60.80
  • 60.42
  • 60.29
  • 60.26
  • 59.59
  • 59.25
  • 59.02
  • 58.76
  • 58.21
  • 57.77
  • 50.61
  • 49.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.19e4
  • 1.19e4
60.19
  • 60.19
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.18
  • 60.18
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.37
  • 56.37
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.49
  • 53.49
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
50.97
  • 50.97
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Orthology information comes from OMA : ENSDARG00000015989.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000015989.

Cross-references

EnsemblENSDARG00000015989 (zdhhc16b)
ZFINZDB-GENE-040426-1301 (zdhhc16b)
EMBLCU459184
Uniprot/SPTREMBLF1R4N0, F1R4N0_DANRE, R4GEX6, R4GEX6_DANRE

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