D. rerio Gene: htr6 - ENSDARG00000016095 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000016095
Namehtr6
Description5-hydroxytryptamine (serotonin) receptor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7839]
OrganismDanio rerio (zebrafish)
Synonym(s)fj36c06, wu:fj36c06
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.14
  • 54.14
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.70
  • 52.70
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.70
  • 50.70
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.42
  • 50.42
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.53e4
  • 1.53e4
  • 1.81e4
48.76
  • 48.76
  • 39.30
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.26
  • 44.26
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
43.93
  • 43.93
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
41.25
  • 41.25
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
41.16
  • 41.16
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.64
  • 40.64
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
  • 2.12e4
39.00
  • 39.00
  • 29.17
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.84e4
  • 1.84e4
  • 1.94e4
38.42
  • 38.42
  • 34.96
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.90e4
  • 1.90e4
  • 1.93e4
  • 1.93e4
  • 1.93e4
  • 2.06e4
36.27
  • 36.27
  • 35.52
  • 35.27
  • 35.27
  • 31.03
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.91e4
  • 1.91e4
36.16
  • 36.16
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.13e4
  • 2.13e4
28.64
  • 28.64
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.19e4
  • 2.19e4
26.76
  • 26.76
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000016095 (htr6)
ZFINZDB-GENE-030131-7839 (htr6)
EMBLBX255940
Uniprot/SPTREMBLE9QFU3, E9QFU3_DANRE

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