D. rerio Gene: trim33 - ENSDARG00000016181 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000016181
Nametrim33
Descriptiontripartite motif containing 33 [Source:ZFIN;Acc:ZDB-GENE-030131-2773]
OrganismDanio rerio (zebrafish)
Synonym(s)cb1085, id:ibd2175, mon, moonshine, tif1 gamma, tif1g, vampire, wu:fc17f10, zgc:136680
Orthologs(s)25 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.16e3
  • 1.16e3
96.12
  • 96.12
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.70e3
  • 1.70e3
94.31
  • 94.31
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.78e3
  • 1.78e3
  • 3.07e3
94.04
  • 94.04
  • 89.72
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
2.02e3
  • 2.02e3
  • 2.21e3
93.25
  • 93.25
  • 92.60
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.05e3
  • 2.05e3
93.14
  • 93.14
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
3.00e3
  • 3.00e3
  • 3.34e3
  • 3.83e3
  • 4.01e3
  • 4.18e3
89.95
  • 89.95
  • 88.83
  • 87.19
  • 86.57
  • 86.02
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
3.21e3
  • 3.21e3
89.26
  • 89.26
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.31e3
  • 3.31e3
  • 7.18e3
88.93
  • 88.93
  • 75.96
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
3.34e3
  • 3.34e3
  • 4.64e3
88.83
  • 88.83
  • 84.46
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
3.70e3
  • 3.70e3
  • 5.97e3
87.62
  • 87.62
  • 80.02
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.84e3
  • 3.84e3
87.13
  • 87.13
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.14e3
  • 4.14e3
86.13
  • 86.13
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.23e3
  • 4.23e3
85.84
  • 85.84
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.62e3
  • 4.62e3
84.53
  • 84.53
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000029Pharyngula:Prim-5
4.73e3
  • 4.73e3
  • 1.34e4
84.16
  • 84.16
  • 54.99
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.82e3
  • 4.82e3
83.85
  • 83.85
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.95e3
  • 4.95e3
83.43
  • 83.43
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.22e3
  • 5.22e3
82.51
  • 82.51
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.34e3
  • 5.34e3
82.12
  • 82.12
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.75e3
  • 5.75e3
80.75
  • 80.75
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.51e3
  • 6.51e3
78.19
  • 78.19
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.68e3
  • 6.68e3
77.63
  • 77.63
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000019Gastrula:Shield
6.72e3
  • 6.72e3
  • 7.47e3
  • 8.71e3
  • 8.79e3
  • 9.25e3
  • 9.60e3
  • 9.67e3
  • 9.96e3
  • 9.96e3
  • 9.96e3
  • 1.10e4
  • 1.12e4
77.49
  • 77.49
  • 75.00
  • 70.82
  • 70.57
  • 69.03
  • 67.85
  • 67.63
  • 66.66
  • 66.65
  • 66.65
  • 63.32
  • 62.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.87e3
  • 6.87e3
77.01
  • 77.01
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
7.13e3
  • 7.13e3
  • 1.45e4
  • 1.45e4
  • 1.48e4
76.12
  • 76.12
  • 51.57
  • 51.56
  • 50.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.40e3
  • 7.40e3
75.21
  • 75.21
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.40e3
  • 8.40e3
71.86
  • 71.86
AEIR
  • AEIR
UBERON:0000089hypoblast (generic)
  • ZFS:0000019Gastrula:Shield
9.96e3
  • 9.96e3
66.66
  • 66.66
AEIR
  • AEIR
UBERON:2000033intermediate cell mass of mesoderm
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.18e4
  • 1.18e4
  • 1.20e4
  • 1.28e4
60.50
  • 60.50
  • 59.98
  • 57.13
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0008781blastodisc derived epiblast
  • ZFS:0000019Gastrula:Shield
1.19e4
  • 1.19e4
60.00
  • 60.00
AEIR
  • AEIR
UBERON:0003061blood island
  • ZFS:0000029Pharyngula:Prim-5
1.24e4
  • 1.24e4
58.33
  • 58.33
AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000029Pharyngula:Prim-5
1.28e4
  • 1.28e4
57.11
  • 57.11
AEIR
  • AEIR
UBERON:0005805dorsal aorta
  • ZFS:0000029Pharyngula:Prim-5
1.39e4
  • 1.39e4
53.55
  • 53.55
AEIR
  • AEIR
UBERON:0002540lateral line system
  • ZFS:0000029Pharyngula:Prim-5
1.41e4
  • 1.41e4
52.75
  • 52.75
AEIR
  • AEIR
UBERON:0008897fin
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.86
  • 50.86
AEIR
  • AEIR
UBERON:0003086caudal artery
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2001063posterior caudal vein
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0001016nervous system
  • ZFS:0000026Segmentation:14-19 somites
1.49e4
  • 1.49e4
49.99
  • 49.99
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species19 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSDARG00000016181.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000016181.

Cross-references

EnsemblENSDARG00000016181 (trim33)
ZFINZDB-GENE-030131-2773 (trim33)
EMBLBX321886
Uniprot/SPTREMBLB0S5U2, B0S5U2_DANRE, F1R9F9, F1R9F9_DANRE

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