D. rerio Gene: clca1 - ENSDARG00000016290 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000016290
Nameclca1
Descriptionchloride channel accessory 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6221]
OrganismDanio rerio (zebrafish)
Synonym(s)fi39d11, wu:fi39d11
Orthologs(s)62 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
761
  • 761
97.46
  • 97.46
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.63e3
  • 7.63e3
74.47
  • 74.47
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.24
  • 65.24
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.27
  • 50.27
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
1.54e4
  • 1.54e4
48.59
  • 48.59
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.66e4
  • 1.66e4
  • 2.77e4
44.55
  • 44.55
  • 7.16
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.80
  • 42.80
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.91e4
  • 1.91e4
35.98
  • 35.98
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.15e4
  • 2.15e4
27.91
  • 27.91
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.40e4
  • 2.40e4
19.63
  • 19.63
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species62 genesCompare expression

Orthology information comes from OMA : ENSDARG00000016290.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi1 geneCompare expression
Euteleostomi2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000016290.

Cross-references

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