D. rerio Gene: clca1 - ENSDARG00000016290 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000016290
Nameclca1
Descriptionchloride channel accessory 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6221]
OrganismDanio rerio (zebrafish)
Synonym(s)fi39d11, wu:fi39d11

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
761
  • 761
97.43126
  • 97.43126
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.63e3
  • 7.63e3
74.22811
  • 74.22811
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
49.80481
  • 49.80481
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
48.90394
  • 48.90394
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
1.54e4
  • 1.54e4
48.10782
  • 48.10782
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.09138
  • 41.09138
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
36.41357
  • 36.41357
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
34.76004
  • 34.76004
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.15e4
  • 2.15e4
27.23370
  • 27.23370
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

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