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D. rerio Gene: cap1 - ENSDARG00000016350 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000016350
Namecap1
DescriptionCAP, adenylate cyclase-associated protein 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6459]
OrganismDanio rerio (zebrafish)
Synonym(s)fj98f01, wu:fj98f01, zgc:63872
Orthologs(s)22 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.15e3
  • 1.15e3
  • 1.43e4
96.16
  • 96.16
  • 52.10
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.42e3
  • 1.42e3
95.27
  • 95.27
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.67e3
  • 1.67e3
  • 9.31e3
  • 9.71e3
94.42
  • 94.42
  • 68.82
  • 67.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.23e3
  • 2.23e3
92.53
  • 92.53
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.57e3
  • 2.57e3
91.38
  • 91.38
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000021Gastrula:90%-epiboly
2.99e3
  • 2.99e3
  • 3.32e3
  • 3.98e3
  • 4.48e3
  • 8.79e3
  • 9.13e3
90.00
  • 90.00
  • 88.89
  • 86.66
  • 85.00
  • 70.57
  • 69.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
3.14e3
  • 3.14e3
  • 3.53e3
  • 5.52e3
  • 5.74e3
  • 6.47e3
89.48
  • 89.48
  • 88.18
  • 81.53
  • 80.77
  • 78.34
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.53e3
  • 3.53e3
88.19
  • 88.19
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.67e3
  • 3.67e3
87.70
  • 87.70
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
3.97e3
  • 3.97e3
  • 1.02e4
86.72
  • 86.72
  • 65.84
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
4.00e3
  • 4.00e3
  • 6.85e3
  • 7.30e3
86.61
  • 86.61
  • 77.08
  • 75.57
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.03e3
  • 4.03e3
86.50
  • 86.50
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
4.07e3
  • 4.07e3
  • 7.72e3
86.38
  • 86.38
  • 74.16
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
4.13e3
  • 4.13e3
86.18
  • 86.18
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.32e3
  • 4.32e3
85.54
  • 85.54
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
5.50e3
  • 5.50e3
  • 7.20e3
  • 9.65e3
  • 9.71e3
  • 1.07e4
  • 1.11e4
81.58
  • 81.58
  • 75.89
  • 67.68
  • 67.50
  • 64.33
  • 62.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
5.89e3
  • 5.89e3
  • 6.46e3
  • 7.87e3
  • 8.36e3
  • 8.80e3
  • 1.05e4
  • 1.12e4
  • 1.16e4
  • 1.18e4
  • 1.19e4
80.29
  • 80.29
  • 78.36
  • 73.65
  • 72.00
  • 70.54
  • 64.75
  • 62.57
  • 61.29
  • 60.51
  • 60.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.89e3
  • 5.89e3
80.28
  • 80.28
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.15e3
  • 6.15e3
  • 8.13e3
79.42
  • 79.42
  • 72.77
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000037Larval:Day 5
  • UBERON:0000106zygote stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
6.29e3
  • 6.29e3
  • 6.91e3
  • 6.96e3
  • 7.04e3
  • 7.68e3
  • 8.59e3
  • 8.82e3
  • 8.95e3
  • 1.02e4
  • 1.03e4
  • 1.08e4
  • 1.08e4
  • 1.17e4
  • 1.17e4
  • 1.41e4
  • 1.48e4
  • 1.50e4
78.93
  • 78.93
  • 76.88
  • 76.70
  • 76.41
  • 74.27
  • 71.23
  • 70.47
  • 70.02
  • 65.85
  • 65.39
  • 63.91
  • 63.73
  • 60.97
  • 60.81
  • 52.87
  • 50.61
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.65e3
  • 6.65e3
77.72
  • 77.72
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.12e3
  • 7.12e3
76.15
  • 76.15
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.22e3
  • 7.22e3
75.84
  • 75.84
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.13e3
  • 8.13e3
72.77
  • 72.77
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.29e3
  • 8.29e3
72.26
  • 72.26
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.40e3
  • 8.40e3
71.88
  • 71.88
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
8.54e3
  • 8.54e3
71.39
  • 71.39
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.72e3
  • 8.72e3
70.80
  • 70.80
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
9.83e3
  • 9.83e3
  • 1.50e4
67.10
  • 67.10
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
1.01e4
  • 1.01e4
  • 1.36e4
  • 1.49e4
66.29
  • 66.29
  • 54.52
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.04e4
  • 1.04e4
65.16
  • 65.16
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
  • 1.26e4
63.94
  • 63.94
  • 57.78
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.63
  • 63.63
AEIR
  • AEIR
ZFA:0000003adaxial cell (Danio)
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
1.25e4
  • 1.25e4
  • 1.33e4
  • 1.49e4
58.31
  • 58.31
  • 55.53
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.26
  • 51.26
AEIR
  • AEIR
UBERON:0000924ectoderm
  • ZFS:0000025Segmentation:10-13 somites
1.49e4
  • 1.49e4
49.99
  • 49.99
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species21 genesCompare expression
Bilateria20 species22 genesCompare expression

Orthology information comes from OMA : ENSDARG00000016350.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000016350.

Cross-references

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