D. rerio Gene: kpna1 - ENSDARG00000016360 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000016360
Namekpna1
Descriptionkaryopherin alpha 1 (importin alpha 5) [Source:ZFIN;Acc:ZDB-GENE-091116-39]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-161h7.7
Orthologs(s)24 orthologs
Paralog(s)7 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.81e3
  • 1.81e3
93.94
  • 93.94
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.13e3
  • 2.13e3
92.88
  • 92.88
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.23e3
  • 2.23e3
  • 2.74e3
92.55
  • 92.55
  • 90.81
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.75e3
  • 2.75e3
90.78
  • 90.78
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
2.90e3
  • 2.90e3
  • 4.11e3
90.31
  • 90.31
  • 86.25
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.03e3
  • 3.03e3
89.85
  • 89.85
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.43e3
  • 3.43e3
88.50
  • 88.50
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.58e3
  • 3.58e3
88.01
  • 88.01
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
3.61e3
  • 3.61e3
  • 4.31e3
  • 4.33e3
  • 4.34e3
  • 4.91e3
87.92
  • 87.92
  • 85.58
  • 85.49
  • 85.48
  • 83.56
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.66e3
  • 3.66e3
87.76
  • 87.76
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
3.96e3
  • 3.96e3
  • 5.21e3
86.75
  • 86.75
  • 82.56
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
4.09e3
  • 4.09e3
86.31
  • 86.31
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
4.10e3
  • 4.10e3
  • 6.57e3
86.28
  • 86.28
  • 78.00
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.24e3
  • 4.24e3
85.80
  • 85.80
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.44e3
  • 4.44e3
85.15
  • 85.15
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.55e3
  • 4.55e3
84.77
  • 84.77
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.90e3
  • 4.90e3
83.58
  • 83.58
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.19e3
  • 5.19e3
82.63
  • 82.63
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.88e3
  • 5.88e3
80.32
  • 80.32
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.71e3
  • 6.71e3
77.55
  • 77.55
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.89e3
  • 6.89e3
76.93
  • 76.93
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.37e3
  • 7.37e3
75.32
  • 75.32
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
8.03e3
  • 8.03e3
73.11
  • 73.11
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
9.28e3
  • 9.28e3
  • 1.04e4
68.94
  • 68.94
  • 65.09
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.21e4
  • 1.21e4
59.42
  • 59.42
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species18 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000016360.

Paralogs (same species)

Cross-references

EnsemblENSDARG00000016360 (kpna1)
ZFINZDB-GENE-091116-39 (kpna1)
Uniprot/SPTREMBLF1QB53, F1QB53_DANRE

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