D. rerio Gene: calcoco1b - ENSDARG00000016391 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000016391
Namecalcoco1b
Descriptioncalcium binding and coiled-coil domain 1b [Source:ZFIN;Acc:ZDB-GENE-031118-126]
OrganismDanio rerio (zebrafish)
Synonym(s)elongin a, tceb3, wu:fw66g10, zgc:56638

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.50e3
  • 2.50e3
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.51e3
  • 2.51e3
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
5.25e3
  • 5.25e3
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
6.78e3
  • 6.78e3
  • 1.76e4
  • 1.77e4
  • 2.00e4
  • 2.08e4
  • 2.15e4
  • 2.16e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
1.09e4
  • 1.09e4
  • 1.46e4
  • 1.48e4
  • 1.76e4
  • 1.77e4
  • 1.78e4
  • 1.80e4
  • 1.83e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.10e4
  • 1.10e4
  • 1.73e4
  • 1.74e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.10e4
  • 1.10e4
  • 1.82e4
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.25e4
  • 1.25e4
  • 1.56e4
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.40e4
  • 1.40e4
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.40e4
  • 1.40e4
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLCABZ01088247, CABZ01088248
EnsemblENSDARG00000016391 (calcoco1b)
Uniprot/SPTREMBLF1RBA9, F1RBA9_DANRE
ZFINZDB-GENE-031118-126 (calcoco1b)

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