D. rerio Gene: farp2 - ENSDARG00000016429 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000016429
Namefarp2
DescriptionFERM, RhoGEF and pleckstrin domain protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2993]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fc23d05, wu:fp25d09
Orthologs(s)17 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
275
  • 275
  • 2.26e3
  • 3.15e3
  • 4.25e3
99.08
  • 99.08
  • 92.44
  • 89.45
  • 85.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.06e3
  • 1.06e3
  • 1.27e3
  • 1.27e3
  • 1.81e3
  • 2.99e3
  • 3.36e3
96.45
  • 96.45
  • 95.76
  • 95.74
  • 93.93
  • 89.99
  • 88.74
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.47e3
  • 1.47e3
95.08
  • 95.08
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000106zygote stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
1.79e3
  • 1.79e3
  • 1.88e3
  • 2.12e3
  • 2.22e3
  • 2.83e3
  • 3.70e3
  • 4.24e3
  • 4.46e3
  • 5.13e3
  • 5.25e3
  • 6.26e3
  • 6.29e3
  • 6.85e3
  • 8.23e3
94.02
  • 94.02
  • 93.72
  • 92.89
  • 92.58
  • 90.52
  • 87.63
  • 85.79
  • 85.08
  • 82.81
  • 82.43
  • 79.04
  • 78.95
  • 77.06
  • 72.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.89e3
  • 1.89e3
93.67
  • 93.67
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.91e3
  • 1.91e3
93.61
  • 93.61
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
2.33e3
  • 2.33e3
  • 3.01e3
  • 3.10e3
  • 3.39e3
  • 5.06e3
  • 6.11e3
  • 6.73e3
  • 6.88e3
  • 7.57e3
  • 1.14e4
92.19
  • 92.19
  • 89.92
  • 89.61
  • 88.64
  • 83.06
  • 79.54
  • 77.48
  • 76.96
  • 74.64
  • 61.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
2.41e3
  • 2.41e3
  • 4.34e3
91.94
  • 91.94
  • 85.48
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
2.98e3
  • 2.98e3
  • 3.34e3
  • 3.58e3
  • 5.07e3
  • 5.40e3
90.01
  • 90.01
  • 88.81
  • 88.02
  • 83.01
  • 81.93
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
3.05e3
  • 3.05e3
89.81
  • 89.81
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
3.79e3
  • 3.79e3
87.30
  • 87.30
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
4.47e3
  • 4.47e3
  • 6.15e3
  • 9.22e3
85.03
  • 85.03
  • 79.40
  • 69.11
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
4.52e3
  • 4.52e3
  • 1.31e4
84.87
  • 84.87
  • 55.99
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.58e3
  • 5.58e3
81.30
  • 81.30
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.59e3
  • 5.59e3
81.28
  • 81.28
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.62e3
  • 5.62e3
81.17
  • 81.17
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.65e3
  • 5.65e3
81.07
  • 81.07
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.97e3
  • 5.97e3
80.00
  • 80.00
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
5.98e3
  • 5.98e3
  • 9.23e3
79.98
  • 79.98
  • 69.08
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.38e3
  • 6.38e3
78.66
  • 78.66
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.47e3
  • 7.47e3
74.99
  • 74.99
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.76e3
  • 9.76e3
67.32
  • 67.32
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.29
  • 66.29
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.95
  • 64.95
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.18
  • 64.18
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.10
  • 63.10
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.61
  • 61.61
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.57
  • 58.57
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.86
  • 54.86
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
52.23
  • 52.23
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000016429.

Cross-references

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