D. rerio Gene: setd3 - ENSDARG00000016513 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000016513
Namesetd3
DescriptionSET domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9137]
OrganismDanio rerio (zebrafish)
Synonym(s)fb01d12, wu:fb01d12, zgc:63842

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.91e3
  • 1.91e3
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.96e3
  • 1.96e3
  • 3.33e3
  • 3.95e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000106zygote stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
2.58e3
  • 2.58e3
  • 2.58e3
  • 3.27e3
  • 3.44e3
  • 3.63e3
  • 3.94e3
  • 4.22e3
  • 4.88e3
  • 4.93e3
  • 5.93e3
  • 6.64e3
  • 6.90e3
  • 7.13e3
  • 7.74e3
  • 1.38e4
  • 1.46e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
2.64e3
  • 2.64e3
  • 3.87e3
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
2.70e3
  • 2.70e3
  • 3.08e3
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.78e3
  • 2.78e3
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
2.81e3
  • 2.81e3
  • 8.57e3
  • 8.72e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
2.94e3
  • 2.94e3
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.95e3
  • 2.95e3
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
3.21e3
  • 3.21e3
  • 3.26e3
  • 3.31e3
  • 3.76e3
  • 3.79e3
  • 4.03e3
  • 4.30e3
  • 4.99e3
  • 5.88e3
  • 6.31e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.33e3
  • 3.33e3
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.34e3
  • 3.34e3
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
3.51e3
  • 3.51e3
  • 4.35e3
  • 4.46e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.72e3
  • 3.72e3
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
3.99e3
  • 3.99e3
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.77e3
  • 4.77e3
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
4.90e3
  • 4.90e3
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
4.96e3
  • 4.96e3
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
5.99e3
  • 5.99e3
  • 6.38e3
  • 7.15e3
  • 7.83e3
  • 8.41e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.29e3
  • 6.29e3
  • 6.72e3
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.32e3
  • 6.32e3
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.36e3
  • 6.36e3
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.21e3
  • 7.21e3
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
7.31e3
  • 7.31e3
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.53e3
  • 7.53e3
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.37e3
  • 8.37e3
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBX088719
EnsemblENSDARG00000016513 (setd3)
Uniprot/SPTREMBLE7FDI9, E7FDI9_DANRE, F1RBB3, F1RBB3_DANRE
ZFINZDB-GENE-030131-9137 (setd3)

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