D. rerio Gene: helz2 - ENSDARG00000016527 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000016527
Namehelz2
Descriptionhelicase with zinc finger 2, transcriptional coactivator [Source:ZFIN;Acc:ZDB-GENE-120920-1]
OrganismDanio rerio (zebrafish)
Synonym(s)gb:eb955855
Orthologs(s)15 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.87e3
  • 4.87e3
83.71
  • 83.71
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.58e3
  • 5.58e3
81.33
  • 81.33
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.67e3
  • 8.67e3
70.96
  • 70.96
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.68e3
  • 8.68e3
70.94
  • 70.94
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.76e3
  • 8.76e3
70.68
  • 70.68
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.83e3
  • 8.83e3
70.43
  • 70.43
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.56
  • 64.56
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.79
  • 57.79
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.51
  • 57.51
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
50.98
  • 50.98
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.92
  • 49.92
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.60
  • 49.60
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.11
  • 47.11
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.40
  • 46.40
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.78
  • 40.78
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
40.17
  • 40.17
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
2.24e4
  • 2.24e4
25.03
  • 25.03
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Clupeocephala1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000016527.

Cross-references

EnsemblENSDARG00000016527 (helz2)
ZFINZDB-GENE-120920-1 (helz2)
EMBLCU929258
Uniprot/SPTREMBLF1QPP3, F1QPP3_DANRE, X1WF29, X1WF29_DANRE

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