D. rerio Gene: sash3 - ENSDARG00000016541 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000016541
Namesash3
DescriptionSAM and SH3 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-130411-1]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.06e3
  • 4.06e3
86.28091
  • 86.28091
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.45e3
  • 5.45e3
81.56930
  • 81.56930
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.53e3
  • 5.53e3
81.30228
  • 81.30228
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.34e3
  • 6.34e3
78.57469
  • 78.57469
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
7.38e3
  • 7.38e3
  • 1.82e4
75.07647
  • 75.07647
  • 38.58046
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.46e3
  • 8.46e3
71.40926
  • 71.40926
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.87e3
  • 8.87e3
70.02508
  • 70.02508
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.32974
  • 62.32974
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
61.80691
  • 61.80691
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.42653
  • 57.42653
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.00127
  • 53.00127
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
52.00578
  • 52.00578
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.38323
  • 51.38323
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
49.58602
  • 49.58602
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
1.81e4
  • 1.81e4
  • 1.81e4
  • 1.98e4
  • 2.05e4
  • 2.07e4
38.67605
  • 38.67605
  • 38.66459
  • 32.93641
  • 30.58354
  • 30.17761
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBX004980
EnsemblENSDARG00000016541 (sash3)
Uniprot/SPTREMBLE7EZR2, E7EZR2_DANRE
ZFINZDB-GENE-130411-1 (sash3)

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