Gene: sash3 - ENSDARG00000016541 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000016541
Name	sash3
Description	SAM and SH3 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-130411-1]
Organism	Danio rerio (zebrafish)

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	4.06e3 4.06e3	86.28091 86.28091	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	5.45e3 5.45e3	81.56930 81.56930	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	5.53e3 5.53e3	81.30228 81.30228	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	6.34e3 6.34e3	78.57469 78.57469	AEIR AEIR
UBERON:0000033	head	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000037Larval:Day 5	7.38e3 7.38e3 1.82e4	75.07647 75.07647 38.58046	AEIR AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	8.46e3 8.46e3	71.40926 71.40926	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	8.87e3 8.87e3	70.02508 70.02508	AEIR AEIR
UBERON:0000948	heart	[+] 1 stage UBERON:0000066fully formed stage	1.11e4 1.11e4	62.32974 62.32974	AEIR AEIR
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	1.13e4 1.13e4	61.80691 61.80691	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	1.26e4 1.26e4	57.42653 57.42653	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	1.39e4 1.39e4	53.00127 53.00127	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	1.42e4 1.42e4	52.00578 52.00578	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.44e4 1.44e4	51.38323 51.38323	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	1.49e4 1.49e4	49.58602 49.58602	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages ZFS:0000037Larval:Day 5 UBERON:0004707pharyngula stage ZFS:0000029Pharyngula:Prim-5 ZFS:0000033Hatching:Long-pec UBERON:0000068embryo stage	1.81e4 1.81e4 1.81e4 1.98e4 2.05e4 2.07e4	38.67605 38.67605 38.66459 32.93641 30.58354 30.17761	AEIR AEIR AEIR AEIR AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Cross-references

EMBL	BX004980
Ensembl	ENSDARG00000016541 (sash3)
Uniprot/SPTREMBL	E7EZR2, E7EZR2_DANRE
ZFIN	ZDB-GENE-130411-1 (sash3)