D. rerio Gene: acadvl - ENSDARG00000016687 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000016687
Nameacadvl
Descriptionacyl-CoA dehydrogenase, very long chain [Source:ZFIN;Acc:ZDB-GENE-030131-899]
OrganismDanio rerio (zebrafish)
Synonym(s)fb52d04, vlcad, wu:fb52d04, wu:fc75e01, zgc:64067
Orthologs(s)24 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
328
  • 328
98.91
  • 98.91
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
546
  • 546
  • 1.53e3
  • 1.09e4
98.17
  • 98.17
  • 94.89
  • 63.44
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
573
  • 573
98.08
  • 98.08
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
774
  • 774
97.41
  • 97.41
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
932
  • 932
96.88
  • 96.88
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.11e3
  • 1.11e3
96.28
  • 96.28
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.15e3
  • 1.15e3
96.16
  • 96.16
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.17e3
  • 1.17e3
96.09
  • 96.09
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
1.48e3
  • 1.48e3
  • 2.34e3
  • 2.42e3
  • 2.72e3
  • 3.23e3
  • 3.99e3
  • 4.99e3
  • 7.27e3
  • 8.54e3
  • 9.49e3
95.06
  • 95.06
  • 92.16
  • 91.90
  • 90.89
  • 89.20
  • 86.64
  • 83.28
  • 75.65
  • 71.40
  • 68.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.50e3
  • 1.50e3
94.99
  • 94.99
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.54e3
  • 1.54e3
94.86
  • 94.86
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.66e3
  • 1.66e3
94.43
  • 94.43
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.91e3
  • 1.91e3
93.61
  • 93.61
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.93e3
  • 1.93e3
  • 2.38e3
  • 2.73e3
93.54
  • 93.54
  • 92.02
  • 90.85
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.99e3
  • 1.99e3
93.35
  • 93.35
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • UBERON:0000106zygote stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • ZFS:0000049segmentation
2.03e3
  • 2.03e3
  • 2.41e3
  • 2.60e3
  • 3.03e3
  • 3.38e3
  • 3.51e3
  • 4.98e3
  • 5.18e3
  • 5.68e3
  • 6.39e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.82e3
  • 6.97e3
  • 7.40e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.48e3
  • 7.69e3
  • 7.91e3
  • 8.43e3
  • 8.79e3
  • 8.96e3
  • 8.96e3
  • 1.32e4
  • 1.39e4
  • 1.41e4
  • 1.45e4
93.22
  • 93.22
  • 91.95
  • 91.29
  • 89.84
  • 88.70
  • 88.25
  • 83.33
  • 82.66
  • 81.00
  • 78.62
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.16
  • 76.66
  • 75.24
  • 74.99
  • 74.99
  • 74.99
  • 74.99
  • 74.94
  • 74.24
  • 73.52
  • 71.79
  • 70.57
  • 69.99
  • 69.99
  • 55.92
  • 53.44
  • 52.86
  • 51.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.07e3
  • 2.07e3
  • 3.96e3
93.07
  • 93.07
  • 86.73
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.56e3
  • 2.56e3
91.42
  • 91.42
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
2.98e3
  • 2.98e3
90.03
  • 90.03
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
3.19e3
  • 3.19e3
  • 4.22e3
  • 7.23e3
  • 1.03e4
  • 1.04e4
89.31
  • 89.31
  • 85.86
  • 75.79
  • 65.42
  • 65.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
3.34e3
  • 3.34e3
  • 4.85e3
  • 6.63e3
  • 7.66e3
  • 7.84e3
  • 8.33e3
88.81
  • 88.81
  • 83.75
  • 77.79
  • 74.35
  • 73.75
  • 72.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.41e3
  • 3.41e3
88.57
  • 88.57
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
3.92e3
  • 3.92e3
  • 5.54e3
  • 1.45e4
86.87
  • 86.87
  • 81.45
  • 51.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.02e3
  • 4.02e3
86.56
  • 86.56
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
4.25e3
  • 4.25e3
  • 6.05e3
  • 6.58e3
  • 9.63e3
85.76
  • 85.76
  • 79.75
  • 77.97
  • 67.74
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
4.41e3
  • 4.41e3
  • 5.07e3
85.24
  • 85.24
  • 83.02
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.71e3
  • 4.71e3
84.24
  • 84.24
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
5.67e3
  • 5.67e3
81.01
  • 81.01
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.32e3
  • 7.32e3
75.49
  • 75.49
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.68e3
  • 7.68e3
74.29
  • 74.29
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.79e3
  • 7.79e3
73.93
  • 73.93
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
8.05e3
  • 8.05e3
73.05
  • 73.05
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.10e3
  • 9.10e3
69.51
  • 69.51
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.54
  • 48.54
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species17 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000016687.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000016687.

Cross-references

EnsemblENSDARG00000016687 (acadvl)
ZFINZDB-GENE-030131-899 (acadvl)
EMBLCR376787
Uniprot/SPTREMBLE9QCR7, E9QCR7_DANRE, F1Q8J4, F1Q8J4_DANRE

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