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D. rerio Gene: abcc6a - ENSDARG00000016750 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000016750
Nameabcc6a
DescriptionATP-binding cassette, sub-family C (CFTR/MRP), member 6a [Source:ZFIN;Acc:ZDB-GENE-050517-18]
OrganismDanio rerio (zebrafish)
Synonym(s)grate
Paralog(s)33 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.17e3
  • 9.17e3
69.31
  • 69.31
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.84
  • 58.84
AEIR
  • AEIR
UBERON:2000001Kupffer's vesicle
  • ZFS:0000024Segmentation:5-9 somites
1.26e4
  • 1.26e4
57.68
  • 57.68
AEIR
  • AEIR
ZFA:0000023forerunner cell group (Danio)
  • ZFS:0000019Gastrula:Shield
1.26e4
  • 1.26e4
57.68
  • 57.68
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.69
  • 54.69
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.30
  • 54.30
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.37e4
  • 1.37e4
  • 1.67e4
53.98
  • 53.98
  • 44.07
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.24
  • 53.24
AEIR
  • AEIR
UBERON:2000555opercular flap
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.83
  • 49.83
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.48
  • 48.48
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.55e4
  • 1.55e4
48.01
  • 48.01
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.69
  • 40.69
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.39
  • 38.39
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
38.10
  • 38.10
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
1.99e4
  • 1.99e4
  • 2.09e4
  • 2.12e4
  • 2.13e4
33.25
  • 33.25
  • 29.91
  • 29.09
  • 28.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.05e4
  • 2.05e4
  • 2.26e4
31.51
  • 31.51
  • 24.28
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Paralogs (same species)

Cross-references

EnsemblENSDARG00000016750 (abcc6a)
ZFINZDB-GENE-050517-18 (abcc6a)
EMBLBX548046
Uniprot/SPTREMBLE7F118, E7F118_DANRE

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