D. rerio Gene: srsf6b - ENSDARG00000016783 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000016783
Namesrsf6b
Descriptionserine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
OrganismDanio rerio (zebrafish)
Synonym(s)sfrs6, sfrs6b, wu:faa54g02, wu:fc17h09, zgc:103497

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
490
  • 490
  • 783
  • 1.37e3
98.34571
  • 98.34571
  • 97.35580
  • 95.38637
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
507
  • 507
98.28976
  • 98.28976
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
585
  • 585
  • 691
  • 785
  • 864
  • 874
  • 1.03e3
  • 1.07e3
  • 1.11e3
  • 1.45e3
  • 2.55e3
98.02613
  • 98.02613
  • 97.66748
  • 97.35071
  • 97.08313
  • 97.04947
  • 96.51192
  • 96.37357
  • 96.23541
  • 95.11676
  • 91.37411
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
604
  • 604
  • 610
  • 623
  • 631
  • 1.19e3
97.96025
  • 97.96025
  • 97.94210
  • 97.89870
  • 97.86977
  • 95.99625
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • UBERON:0000106zygote stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000028Segmentation:26+ somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
668
  • 668
  • 718
  • 779
  • 818
  • 881
  • 1.21e3
  • 1.36e3
  • 1.38e3
  • 1.50e3
  • 1.69e3
  • 2.01e3
  • 2.06e3
  • 2.13e3
  • 2.51e3
  • 3.52e3
  • 4.04e3
  • 4.04e3
  • 4.04e3
  • 4.04e3
  • 4.04e3
  • 4.04e3
  • 4.04e3
  • 4.04e3
  • 4.04e3
  • 4.04e3
  • 4.04e3
  • 4.04e3
  • 4.04e3
  • 4.63e3
  • 4.93e3
  • 4.93e3
  • 4.93e3
  • 4.93e3
  • 5.22e3
  • 6.09e3
  • 6.91e3
  • 6.91e3
  • 1.41e4
  • 1.42e4
  • 1.46e4
97.74702
  • 97.74702
  • 97.57620
  • 97.37196
  • 97.23919
  • 97.02538
  • 95.91251
  • 95.41370
  • 95.33081
  • 94.92354
  • 94.28347
  • 93.21015
  • 93.02770
  • 92.79568
  • 91.53228
  • 88.09259
  • 86.36196
  • 86.36196
  • 86.36196
  • 86.36196
  • 86.36196
  • 86.36196
  • 86.36196
  • 86.36196
  • 86.36196
  • 86.36196
  • 86.36196
  • 86.36196
  • 86.36196
  • 84.36993
  • 83.32996
  • 83.32996
  • 83.32827
  • 83.32658
  • 82.34677
  • 79.40331
  • 76.65821
  • 76.65821
  • 52.22331
  • 51.88136
  • 50.68197
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
779
  • 779
  • 1.72e3
97.36958
  • 97.36958
  • 94.19330
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
787
  • 787
97.34173
  • 97.34173
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
807
  • 807
97.27578
  • 97.27578
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
861
  • 861
  • 1.48e4
97.09236
  • 97.09236
  • 49.91550
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.03e3
  • 1.03e3
96.51868
  • 96.51868
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
1.05e3
  • 1.05e3
  • 3.82e3
  • 3.90e3
96.44257
  • 96.44257
  • 87.09300
  • 86.81737
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.29e3
  • 1.29e3
95.64666
  • 95.64666
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.30e3
  • 1.30e3
95.61962
  • 95.61962
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.31e3
  • 1.31e3
95.58603
  • 95.58603
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.36e3
  • 1.36e3
95.42359
  • 95.42359
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.40e3
  • 1.40e3
95.26015
  • 95.26015
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.49e3
  • 1.49e3
  • 2.61e3
94.97088
  • 94.97088
  • 91.17616
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.52e3
  • 1.52e3
94.86441
  • 94.86441
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
1.52e3
  • 1.52e3
  • 1.20e4
94.85847
  • 94.85847
  • 59.59010
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.71e3
  • 1.71e3
94.22034
  • 94.22034
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.83e3
  • 1.83e3
  • 1.88e3
  • 2.05e3
93.81546
  • 93.81546
  • 93.63862
  • 93.06241
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
2.12e3
  • 2.12e3
92.84674
  • 92.84674
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
2.65e3
  • 2.65e3
  • 2.98e3
91.04597
  • 91.04597
  • 89.93069
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
2.69e3
  • 2.69e3
90.92258
  • 90.92258
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.13e3
  • 4.13e3
86.05558
  • 86.05558
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLAL935272
EnsemblENSDARG00000016783 (srsf6b)
Uniprot/SPTREMBLA8DZG2, A8DZG2_DANRE
ZFINZDB-GENE-041219-1 (srsf6b)

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