D. rerio Gene: zgc:152891 - ENSDARG00000016789 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000016789
Namezgc:152891
Descriptionzgc:152891 [Source:ZFIN;Acc:ZDB-GENE-061013-229]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fi89d03, zgc:153926
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.70e3
  • 2.70e3
90.96
  • 90.96
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.68e3
  • 6.68e3
77.63
  • 77.63
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
7.17e3
  • 7.17e3
  • 8.47e3
75.99
  • 75.99
  • 71.65
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.57e3
  • 7.57e3
74.65
  • 74.65
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
8.54e3
  • 8.54e3
  • 1.50e4
71.41
  • 71.41
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.90e3
  • 8.90e3
70.18
  • 70.18
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
9.89e3
  • 9.89e3
  • 1.58e4
66.88
  • 66.88
  • 47.02
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.56
  • 65.56
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.35
  • 59.35
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.72
  • 55.72
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.53
  • 55.53
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.25
  • 50.25
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.11
  • 50.11
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.55
  • 49.55
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.21
  • 47.21
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
40.56
  • 40.56
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
1.78e4
  • 1.78e4
  • 1.87e4
  • 2.07e4
40.25
  • 40.25
  • 37.44
  • 30.66
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
38.90
  • 38.90
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.72
  • 36.72
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.34
  • 36.34
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
2.02e4
  • 2.02e4
  • 2.20e4
32.20
  • 32.20
  • 26.48
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata6 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000016789.

Cross-references

EnsemblENSDARG00000016789 (zgc:152891)
ZFINZDB-GENE-061013-229 (zgc:152891)
EMBLCT574573
Uniprot/SPTREMBLF1QKM3, F1QKM3_DANRE

Do not show this banner again